Gene Rpic12D_3815 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_3815 
Symbol 
ID8021502 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012857 
Strand
Start bp382964 
End bp384235 
Gene Length1272 bp 
Protein Length423 aa 
Translation table11 
GC content67% 
IMG OID644832605 
Productnatural resistance-associated macrophage protein 
Protein accessionYP_002983746 
Protein GI241665387 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1914] Mn2+ and Fe2+ transporters of the NRAMP family 
TIGRFAM ID[TIGR01197] NRAMP (natural resistance-associated macrophage protein) metal ion transporters 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCCGTCA CGGACGATGC CCCGTGGTAC CGCCGGCTGG GGCCCGGCCT GATCACGGGG 
GCGGCGGACG ACGACCCCAG TGGCATTGCC ACGTATGCCC AGGCCGGCGC GCAGGCCGGC
ACGAGCATGC TGTGGACGCT CTTGCTCACC CTGCCGCTGA TGATCGCGAT CCAGCTTGTC
AGCGCACGGT TGGGGCGCGT CTCGGGTCGC GGCGTGGTGG CGAACATCCG TCGGCATCAT
TCGCCGTGGC TGGCGTATGC CTTCGTCGCG CTCGTCACGC TGGCGAACAT CATCAACGTG
GGGGCCGACA TTGCTGCCAT GGGCGACAGC GTGCGCCTGT TGCTGGGCGG GTCGACGGTC
TGGTATGCGT GTGCGTTTGC TGCGGTGTCG CTGTTGGTGC AGGTGTGGAT GCCGTATCGG
CGCTATGCCC GGTATCTGCA GTGGACTGCG CTGTCGCTGC TGGCCTACGT AGCCACGGCG
TTTGTCGTGA AGGTGGATTG GCTGCACGCG CTGCACGATA CCGTGGTGCC GCAGCTGCGG
TGGTCCAAGG AATACGTGAT GACGCTGATT GCCGTGTTCG GCACCACGAT CAGTCCGTAT
CTGTTTGTCT GGCAGGCCGC CGGCGAGGTC GAGGAGACGC GCTTGGGCGA AGGCGAGGCG
CCGCTGAAGA AAGCGCCGTG GCAGGCGCCG TGGCAGTTGG CACGCATCCG CATCGACACC
ACGGTCGGCA TGCTCGTGTC CGCCTTCATC GCGTTCTGCA TCATGCTCAC GGCGGCCTAT
GCGCTGCATA TCCATGGCGT GACGCAGATC GAGACGTGCG CGCAGGCAGC CGAAGCGCTC
AAACCGGTGG CGGGCCGCTT TGCCCAGATG TTGTTTGCGC TGGGCGTGGT GGGCACGGGG
CTGCTGGCGG TGCCCGTGCT GGCGGGCTCG GCTGCCTACG CCGCAGCGGA AGCCTTCCAG
TGGCACAGCA GCCTGGAGTC CAACGTGCAA GGCGCCCCGA AGTTCTACCT GTTCCTGGCG
CTGGTCATGG CCGCTGCCAC GGCCATGGTG TTTCTGCCTA TCGAACCCTT CAAGCTGCTC
TACTGGGCCG CGGTGCTCAA TGGCGTGGCC GCGACGCCGG TCATGGTGGT GCTGCAGCTG
ATGTCGCGCC GCAAGACCGT GATGGGGCAG TTCCGCAGCT CTCCGCTGCT GCACGGCGCG
GCCTGGGCCG CCACGTTGTG CATGTGTGTC AGCACGGTGC TGTTTTTCGT GCTGGCCGCT
CACGGGAGCT GA
 
Protein sequence
MPVTDDAPWY RRLGPGLITG AADDDPSGIA TYAQAGAQAG TSMLWTLLLT LPLMIAIQLV 
SARLGRVSGR GVVANIRRHH SPWLAYAFVA LVTLANIINV GADIAAMGDS VRLLLGGSTV
WYACAFAAVS LLVQVWMPYR RYARYLQWTA LSLLAYVATA FVVKVDWLHA LHDTVVPQLR
WSKEYVMTLI AVFGTTISPY LFVWQAAGEV EETRLGEGEA PLKKAPWQAP WQLARIRIDT
TVGMLVSAFI AFCIMLTAAY ALHIHGVTQI ETCAQAAEAL KPVAGRFAQM LFALGVVGTG
LLAVPVLAGS AAYAAAEAFQ WHSSLESNVQ GAPKFYLFLA LVMAAATAMV FLPIEPFKLL
YWAAVLNGVA ATPVMVVLQL MSRRKTVMGQ FRSSPLLHGA AWAATLCMCV STVLFFVLAA
HGS