Gene Rpic12D_3746 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_3746 
Symbol 
ID8021433 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012857 
Strand
Start bp304416 
End bp304994 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content68% 
IMG OID644832536 
Productprotein of unknown function DUF1470 
Protein accessionYP_002983677 
Protein GI241665318 
COG category[R] General function prediction only 
COG ID[COG5516] Conserved protein containing a Zn-ribbon-like motif, possibly RNA-binding 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.10286 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGCCA CCGCATCCCG GGAGATTCCC CCGCTGATCG CCGATCATCC GGTGCTCGAC 
ATGCTCAACA CCGTGGCCAA CGCCAATGGC CAGCCGCACG ATTGCTGGCA GACCGATGCC
GATGTCTCTG ACTGGCTGAT ACGCGCTGGC TGGCTTGCCG AGCCGCTGGC GGGGCGTTAT
CCACCGGGCG TGCTGCTGGC TGTGGCGCGC CATCTGCGCG AGGTGACCCG CATGCTGGTT
GAGGCGCGCA AGGCCGGCCG CGCCGCCAAC GCGGACGCGA TCAACGTGCT CCTGCGCCAG
GCGCCAAGCC ATCCGGTGCT GGTGTGGAAC GACAAGACGC CACGCGTGGA GCTGCTGCGC
CCGGCCGATT CGGTCGAGCA GTGCCTCGCC CCGCTGGCCG AGGCGGCAGC CCACCTGCTG
GCCGAAGGGG ATTTCGGGCT CGTGCGCATG TGCGAATACC CGGAATGCAC GCGGTGGTTC
TACGACCGCA CGAAGTCGCA CAAGCGCCGC TGGTGCAGCA TGGGCGTCTG CGGCAATCGA
CATAAAGTGG CGGAATACCG CAGGCGCCAG CAAGGCTGA
 
Protein sequence
MPATASREIP PLIADHPVLD MLNTVANANG QPHDCWQTDA DVSDWLIRAG WLAEPLAGRY 
PPGVLLAVAR HLREVTRMLV EARKAGRAAN ADAINVLLRQ APSHPVLVWN DKTPRVELLR
PADSVEQCLA PLAEAAAHLL AEGDFGLVRM CEYPECTRWF YDRTKSHKRR WCSMGVCGNR
HKVAEYRRRQ QG