Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_3746 |
Symbol | |
ID | 8021433 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012857 |
Strand | + |
Start bp | 304416 |
End bp | 304994 |
Gene Length | 579 bp |
Protein Length | 192 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644832536 |
Product | protein of unknown function DUF1470 |
Protein accession | YP_002983677 |
Protein GI | 241665318 |
COG category | [R] General function prediction only |
COG ID | [COG5516] Conserved protein containing a Zn-ribbon-like motif, possibly RNA-binding |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.10286 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCGCCA CCGCATCCCG GGAGATTCCC CCGCTGATCG CCGATCATCC GGTGCTCGAC ATGCTCAACA CCGTGGCCAA CGCCAATGGC CAGCCGCACG ATTGCTGGCA GACCGATGCC GATGTCTCTG ACTGGCTGAT ACGCGCTGGC TGGCTTGCCG AGCCGCTGGC GGGGCGTTAT CCACCGGGCG TGCTGCTGGC TGTGGCGCGC CATCTGCGCG AGGTGACCCG CATGCTGGTT GAGGCGCGCA AGGCCGGCCG CGCCGCCAAC GCGGACGCGA TCAACGTGCT CCTGCGCCAG GCGCCAAGCC ATCCGGTGCT GGTGTGGAAC GACAAGACGC CACGCGTGGA GCTGCTGCGC CCGGCCGATT CGGTCGAGCA GTGCCTCGCC CCGCTGGCCG AGGCGGCAGC CCACCTGCTG GCCGAAGGGG ATTTCGGGCT CGTGCGCATG TGCGAATACC CGGAATGCAC GCGGTGGTTC TACGACCGCA CGAAGTCGCA CAAGCGCCGC TGGTGCAGCA TGGGCGTCTG CGGCAATCGA CATAAAGTGG CGGAATACCG CAGGCGCCAG CAAGGCTGA
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Protein sequence | MPATASREIP PLIADHPVLD MLNTVANANG QPHDCWQTDA DVSDWLIRAG WLAEPLAGRY PPGVLLAVAR HLREVTRMLV EARKAGRAAN ADAINVLLRQ APSHPVLVWN DKTPRVELLR PADSVEQCLA PLAEAAAHLL AEGDFGLVRM CEYPECTRWF YDRTKSHKRR WCSMGVCGNR HKVAEYRRRQ QG
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