| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_3693 |
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| Symbol | |
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| ID | 8021380 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012857 |
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| Strand | + |
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| Start bp | 248020 |
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| End bp | 250428 |
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| Gene Length | 2409 bp |
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| Protein Length | 802 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644832483 |
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| Product | lipoprotein transmembrane |
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| Protein accession | YP_002983624 |
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| Protein GI | 241665265 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4258] Predicted exporter |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.432372 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.281955 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCAGC AGTTGGCGAT ACGCCCGTCG GTGCAGTCTG CTTGGGCCAT CCGGCTCGGC
TGGCTCGCGC TGGTGCTGGC CGCCGTGCTC TATTGCGCCG TGCGGCTGCA CGATGGCACG
GCACTTCAGA CGAACCTGCT GGCGTTGTTG CCTGCCACCG AGGCCGATCC GGTCGCGGAA
CAGGCCGTGG ATACGCTGGC GGCATCCCTG GGCGACCGCA CCGTGTTCCT GCTCAGCAGT
CGCGACGCCG AGCACGCCAA GGCCGCCGCC ATTCACCTTG GCGCACAGCT CAAGCGCAGT
GGTGCCTTCC GTAGCGTGAT TGCCGAGCTT CCGCCATTCG ATGCCGGCCA GATCACACGG
TCCTACCTGC CCTACCGGTT CGGCCTGCTG AGCGCCGCCG ACCGCGCCGC GCTGGATCGC
ACGTCGACGG CGCTGCCAAG GCTGCTGGCG CAGCGGCTCT ATGCGCCCGT CGAGGCCGGC
TTGAGCGCCC CGCTGGCCGA TGATCCGTTT GGATGGCTCG GGCACTGGCT GGCGGACCTC
CCGCTGGCGA CGACGCGGCT GGAGCTCGAA GACAACTTCC TCGTCGCACG GCGTGGCGAC
ACGATCAGCG TACTGGTGGC GGGTACGCTC GCTGCCTCAG CCTACGATGC CCAAACCCAG
GCCACCGTGC GCAGTGCAGT CGCCCAGGCT CAGCACGCCC TCGCGCAGAC TTTTCCCGAC
GTGACCCTGT TGCGCACCGG CGCGGTCTTC TACGCGGCTG CCGCTCGCAG TGCTTCGGAG
CATGAGTTGC ATCGGATCGG CATCCTCTCT ATGTGCGGGA TCGCGCTATT GATGCTGTGG
GTGTTCCGCT CGCCGCGCTT TCTGCTGCTT GGATTCCTGT CCACCGGCAT TGGCACCGTG
TGCGCGCTCG CGACGACGCT GCTGCTGTTC GGCAAGCTGC ATCTGCTGAC GCTCGTGTTC
GGTGCGAGCC TGATCGGCGA GGCGGTGGAC TACTCCATCC AGTATTTCGT CACGCACCTC
GGCGCCGAAG CCAGCCACGA TGCGCGGCGC AGTGCGCGCG ATGTCCGCCC GGCACTGCTG
GTCGCCCTCG CTACCAGCCT GCTTGGCTAT GCGATCCTGG CTGGCGTGCC GTTTCCCGCG
CTGCGGCAGA TCGCATGCTT TGCCATGGCT GGTATCGGGG CCGCCTATCT GTCGGTTGCC
ACCCTGCTGC CGGCGCTGCT GCTGCATGCG CCACGACAGC CTCGCCGCAC CTACCGCCGC
GCGGCGCGTT GGCTGGGGGC TTGGCAGGCA GCGCTGACGA GCCGGAGCGC ATGGCTTTGC
CTCGCCTTGA TTGCCGCGGC CGCGGTGCCG GGCTGGTTGC GCTTGACGAG CGATGACGAC
ATCCACCTGC TGATCCAGCG CGATCCCGAG CTGGCGCAGC AGGAAGCCAT CGTGCGCGAA
ACCATAGGCC TGGAAGGCAG CACGCAGTTC TTCGTCGTAC AGGGCAATTC GGCCGAACAG
GTGCTGCAAC GCGCCGAAGC GCTCCAACGC AAACTGGAAG GCCCGATTGC GGGTGCCCCG
ATCAAGGGCG TGCAGTCGGT GACACAATTC GTGCCGTCAG CGCGTCAGCA AGCCGAAGAC
CGGGCGCGCC TCGGCCAGCG CGTCTTCGCA GATCGACAGG CCCTGGCCAC CGCATTGCTC
GATGCCGGAT TTCGCCCGGA AGTCGCTGCC AATTACGTCG ATGCCTTCGG CGGCGCCCAG
AGCGGTCCGC TGACGGTAGA TGCCTGGCTG GCAATGCCTT GGTCGCAGCC CTATCGGCAC
CTGTGGTTGG GACGGGTGGC CCAGGCGCAA GCGCCGACCT ATGCCGCGAT CGTCATCCCT
GCCGGTGCAA CAGTTGCGCA GTTGCCGGCG CTCGCTGCAC TGGCTGACGG CGAAGCCGGC
ATCCGCTTCG TAGACAAGCC CGCGAGTGTC GCCCGCCTGT TCGCGGCTTA CCGCGTCGAC
AGCGGATGGT GGCTGGCCGG CGCGCTCGTG ATGGTCCTCG TGCTGTTCTG CGTGCGCTAC
GGTCCGGCGA ACGGTGCACG CGTGACGCTG CCGGTCGTCC TTGCCGTCGG CATCACGTTT
GCGGCCTATG GTTACGCCGG CATGCCGCTG AATCTGTTCC ATTGGCTTGC CCTGATGCTC
GTGCTGGGCG TTGGCGCCAA CTACGCCGTG TTCCTGCGTG AAGGCTGTGC GCGTCGGCAC
GCTGACATTG GCGGCGTGTG GGTTGGCGTG CTGCTGTCGG CGGGGACCAC GCTGCTGTCG
TTCGGCCTGC TTGGCGCGAG CGCCATGCCG GTGTTGCGCA GCTTCGGGAT GACGCTGGCC
CTGGGCATCG TCATTGCGGT GGCGCTGGCG CCGCTGGGCA TGCCGCTGAT CAAGAATCGA
CACGCATGA
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| Protein sequence | MTQQLAIRPS VQSAWAIRLG WLALVLAAVL YCAVRLHDGT ALQTNLLALL PATEADPVAE
QAVDTLAASL GDRTVFLLSS RDAEHAKAAA IHLGAQLKRS GAFRSVIAEL PPFDAGQITR
SYLPYRFGLL SAADRAALDR TSTALPRLLA QRLYAPVEAG LSAPLADDPF GWLGHWLADL
PLATTRLELE DNFLVARRGD TISVLVAGTL AASAYDAQTQ ATVRSAVAQA QHALAQTFPD
VTLLRTGAVF YAAAARSASE HELHRIGILS MCGIALLMLW VFRSPRFLLL GFLSTGIGTV
CALATTLLLF GKLHLLTLVF GASLIGEAVD YSIQYFVTHL GAEASHDARR SARDVRPALL
VALATSLLGY AILAGVPFPA LRQIACFAMA GIGAAYLSVA TLLPALLLHA PRQPRRTYRR
AARWLGAWQA ALTSRSAWLC LALIAAAAVP GWLRLTSDDD IHLLIQRDPE LAQQEAIVRE
TIGLEGSTQF FVVQGNSAEQ VLQRAEALQR KLEGPIAGAP IKGVQSVTQF VPSARQQAED
RARLGQRVFA DRQALATALL DAGFRPEVAA NYVDAFGGAQ SGPLTVDAWL AMPWSQPYRH
LWLGRVAQAQ APTYAAIVIP AGATVAQLPA LAALADGEAG IRFVDKPASV ARLFAAYRVD
SGWWLAGALV MVLVLFCVRY GPANGARVTL PVVLAVGITF AAYGYAGMPL NLFHWLALML
VLGVGANYAV FLREGCARRH ADIGGVWVGV LLSAGTTLLS FGLLGASAMP VLRSFGMTLA
LGIVIAVALA PLGMPLIKNR HA
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