| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_3673 |
|---|
| Symbol | |
|---|
| ID | 8021360 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12D |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012857 |
|---|
| Strand | - |
|---|
| Start bp | 230578 |
|---|
| End bp | 231399 |
|---|
| Gene Length | 822 bp |
|---|
| Protein Length | 273 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 644832463 |
|---|
| Product | flagellin domain protein |
|---|
| Protein accession | YP_002983604 |
|---|
| Protein GI | 241665245 |
|---|
| COG category | [N] Cell motility |
|---|
| COG ID | [COG1344] Flagellin and related hook-associated proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0474739 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCCTCA GCCTCAATAC CAACATCTCC TCCCTGCAAA CGCAGCAAGC ACTGTCGCAA
TCGCAGTCCG CTCTGCAAAC GTCGCTGGAG CGCCTGTCGA CCGGTCTGCG CGTGAACAGC
GCCAAGGATG ACGCCGCCGC CTACGCTGTG GCCAGCAGCC TGACCACCAA GCTGAACTCG
CAAACGCAAG GTATCCAGAA CTCTAACCAG GCACTGGCGT ACCTGCAAAC GTCCGATTCG
TACCTGGGCC AGGTGGAAAA CAACCTGCAG CGCATGCGCC AACTGGCCGT TGAAGCCAAC
AACGGCGGCC TGTCGACCAC TGACCAGGCC AACCTGGACA AGGAATACCA ACAGCTGGCT
GCAGCCAACA AGAGTATCGA GACCAACGCT AACTACAACG GCAACAAGCT GTTCGATGGT
TCGGTCACGT CCACGACGTT CCAGTACGGT CAGAATGCGG CGACCGATAC GACTACCGTC
ACCAACGCCA ACCTGGCAAG CTTCGGCACG CTGTCTGGTA CCAGCGTGAG CACGACCGCC
AACGCGACTG CTGCCCAGGC GGCCATCGAC ACCGATCTGA CCAACCTGAA GGCAGCTCGC
GCGAGCCTGG GTGCCCAGCA AAGCGGCCTG AACTCGACGA TCAATACGCT GACCTCGTCG
AACACCGCCC TTTCGGCTGC CAAGTCGTCG ATGATCGACA CGGATTACGC TGCGGAAACG
TCGAACATGA CCCGCCAGAA CATCCTGCAG CAAGCGGGTA CGGCAATGCT GGCGCAAGCC
AACTCGGCAC CGAACAGCAT CCTGAGCCTG CTGAAGGGCT AA
|
|---|
| Protein sequence | MSLSLNTNIS SLQTQQALSQ SQSALQTSLE RLSTGLRVNS AKDDAAAYAV ASSLTTKLNS
QTQGIQNSNQ ALAYLQTSDS YLGQVENNLQ RMRQLAVEAN NGGLSTTDQA NLDKEYQQLA
AANKSIETNA NYNGNKLFDG SVTSTTFQYG QNAATDTTTV TNANLASFGT LSGTSVSTTA
NATAAQAAID TDLTNLKAAR ASLGAQQSGL NSTINTLTSS NTALSAAKSS MIDTDYAAET
SNMTRQNILQ QAGTAMLAQA NSAPNSILSL LKG
|
|---|
| |