Gene Rpic12D_3669 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_3669 
Symbol 
ID8021356 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012857 
Strand
Start bp226359 
End bp227453 
Gene Length1095 bp 
Protein Length364 aa 
Translation table11 
GC content65% 
IMG OID644832459 
Productglycosyl transferase family 2 
Protein accessionYP_002983600 
Protein GI241665241 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.765348 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.962708 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGAGG CTAGTGTGCA ATTGACGTCT CCCGACCTTG CGCTCGTCGT CATCGCCCGC 
AACGAAGCCG CCAGCATTGA ACGATGCCTG CTCAGCGCCA AGCCCTTCGT CAGCCGGATG
GTGGTGCTCG ATACCGGCTC CACCGACGAC ACGGTCGCCA TTGCCGAGGC CTGTGGCGCC
CGGGTGAGCC ACTTCGCCTG GACGGATGAT TTCTCCGCGG CCCGCAATGC GGCGCTCGCG
GCGGCCAATG CCGACTGGAA CCTGGTCCTC GACGCCGACG AGTGGCTGGA AAGCGGCGGC
GAACATCTCC GCATGCTGGG TAGCACGCCG CCTTCACTCG GCGTGGTCTG CGTCAAGAAC
GATACCGATG CGGGCGAATC GAGCCACCTG ATTGCATGGA TTCCGCGCCT GTTGCCACGC
GGCGTGCGCT ATGTGGGGCG CATCCACGAG CAACCCGTGT CGTCCTTGCC CGCTGCGCGA
GTGCCGGTTG TGATCCGTCA CGATGGCTAC ACCCCCGCGA AGATGCAGCA CAAGGGCGAA
CGCAACACCC GCCTGCTGCT GGCCGAACTC GAACATCGGC CGGATGATCC GTATGTGCTG
TACCAGCTCG GCAAGGAAAC CGAGCTCCAT CGGGAAGACC ACGCAACGGC CGCGCAATAC
TACGCCCGTG CCTATGACCT GGCACCGCCG GACGCGCCCT ATCGCTGCAA TCTGGCGCTA
CGGTATCTGT ATTGCCTCGG CAAGGCGGAC CGGATGGAAG ATGCCATGGC GCATGCGGAT
GTCAGCATCC GCGCGTGGCC GGATTTTCCC GATCTGTGTT TTGCGTTGGG TCTCGTGCTG
GTGGACGCCG CGGTCAGGCA CCCCGAAGAC GCCGATACCC GCTGGCTGCC GCTGGCGGAA
CAGGTCTTCA ACCGGTGCCT GGAAATCGGG GACCGCGCAG ACATGGATGG CAGCGTGACC
GGTCGAGGCA GCTTCCTGGC CGCCCAGCAA CTCGCCATCG TGTATCAGAT GCAGAGCCGT
GCGCTGGCCC GTAAGTCAGA GCAGTATCTT GCGATGTCGA AACGGCTGCA GGACGCCCCG
CAGCCGCTCG CCTAG
 
Protein sequence
MSEASVQLTS PDLALVVIAR NEAASIERCL LSAKPFVSRM VVLDTGSTDD TVAIAEACGA 
RVSHFAWTDD FSAARNAALA AANADWNLVL DADEWLESGG EHLRMLGSTP PSLGVVCVKN
DTDAGESSHL IAWIPRLLPR GVRYVGRIHE QPVSSLPAAR VPVVIRHDGY TPAKMQHKGE
RNTRLLLAEL EHRPDDPYVL YQLGKETELH REDHATAAQY YARAYDLAPP DAPYRCNLAL
RYLYCLGKAD RMEDAMAHAD VSIRAWPDFP DLCFALGLVL VDAAVRHPED ADTRWLPLAE
QVFNRCLEIG DRADMDGSVT GRGSFLAAQQ LAIVYQMQSR ALARKSEQYL AMSKRLQDAP
QPLA