Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_3669 |
Symbol | |
ID | 8021356 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012857 |
Strand | + |
Start bp | 226359 |
End bp | 227453 |
Gene Length | 1095 bp |
Protein Length | 364 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 644832459 |
Product | glycosyl transferase family 2 |
Protein accession | YP_002983600 |
Protein GI | 241665241 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0463] Glycosyltransferases involved in cell wall biogenesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.765348 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.962708 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGAGG CTAGTGTGCA ATTGACGTCT CCCGACCTTG CGCTCGTCGT CATCGCCCGC AACGAAGCCG CCAGCATTGA ACGATGCCTG CTCAGCGCCA AGCCCTTCGT CAGCCGGATG GTGGTGCTCG ATACCGGCTC CACCGACGAC ACGGTCGCCA TTGCCGAGGC CTGTGGCGCC CGGGTGAGCC ACTTCGCCTG GACGGATGAT TTCTCCGCGG CCCGCAATGC GGCGCTCGCG GCGGCCAATG CCGACTGGAA CCTGGTCCTC GACGCCGACG AGTGGCTGGA AAGCGGCGGC GAACATCTCC GCATGCTGGG TAGCACGCCG CCTTCACTCG GCGTGGTCTG CGTCAAGAAC GATACCGATG CGGGCGAATC GAGCCACCTG ATTGCATGGA TTCCGCGCCT GTTGCCACGC GGCGTGCGCT ATGTGGGGCG CATCCACGAG CAACCCGTGT CGTCCTTGCC CGCTGCGCGA GTGCCGGTTG TGATCCGTCA CGATGGCTAC ACCCCCGCGA AGATGCAGCA CAAGGGCGAA CGCAACACCC GCCTGCTGCT GGCCGAACTC GAACATCGGC CGGATGATCC GTATGTGCTG TACCAGCTCG GCAAGGAAAC CGAGCTCCAT CGGGAAGACC ACGCAACGGC CGCGCAATAC TACGCCCGTG CCTATGACCT GGCACCGCCG GACGCGCCCT ATCGCTGCAA TCTGGCGCTA CGGTATCTGT ATTGCCTCGG CAAGGCGGAC CGGATGGAAG ATGCCATGGC GCATGCGGAT GTCAGCATCC GCGCGTGGCC GGATTTTCCC GATCTGTGTT TTGCGTTGGG TCTCGTGCTG GTGGACGCCG CGGTCAGGCA CCCCGAAGAC GCCGATACCC GCTGGCTGCC GCTGGCGGAA CAGGTCTTCA ACCGGTGCCT GGAAATCGGG GACCGCGCAG ACATGGATGG CAGCGTGACC GGTCGAGGCA GCTTCCTGGC CGCCCAGCAA CTCGCCATCG TGTATCAGAT GCAGAGCCGT GCGCTGGCCC GTAAGTCAGA GCAGTATCTT GCGATGTCGA AACGGCTGCA GGACGCCCCG CAGCCGCTCG CCTAG
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Protein sequence | MSEASVQLTS PDLALVVIAR NEAASIERCL LSAKPFVSRM VVLDTGSTDD TVAIAEACGA RVSHFAWTDD FSAARNAALA AANADWNLVL DADEWLESGG EHLRMLGSTP PSLGVVCVKN DTDAGESSHL IAWIPRLLPR GVRYVGRIHE QPVSSLPAAR VPVVIRHDGY TPAKMQHKGE RNTRLLLAEL EHRPDDPYVL YQLGKETELH REDHATAAQY YARAYDLAPP DAPYRCNLAL RYLYCLGKAD RMEDAMAHAD VSIRAWPDFP DLCFALGLVL VDAAVRHPED ADTRWLPLAE QVFNRCLEIG DRADMDGSVT GRGSFLAAQQ LAIVYQMQSR ALARKSEQYL AMSKRLQDAP QPLA
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