| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_3665 |
|---|
| Symbol | |
|---|
| ID | 8021352 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12D |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012857 |
|---|
| Strand | + |
|---|
| Start bp | 223679 |
|---|
| End bp | 224953 |
|---|
| Gene Length | 1275 bp |
|---|
| Protein Length | 424 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 644832455 |
|---|
| Product | glycosyl transferase family 2 |
|---|
| Protein accession | YP_002983596 |
|---|
| Protein GI | 241665237 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0463] Glycosyltransferases involved in cell wall biogenesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0894681 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 0.744723 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGAGA TCGAAGCAAT CCAAACCGAA GCGCTGCAGG ACATCGCGCC CGTGAAGCAC
GACGCGGTCA TCCAGCAGGT TGCGCTGAGC GTCTGCATCC CGACCTACAA CCGCGCCCGC
TATCTCGAGA ATCTGCTTGC AGAACTCGTC TCGCAGATTG GCGAGCTGAA GTTCAGCTAC
GAATTGCTGA TCGGCGACAA CTGCTCGACC GACGCCACCG AAGAGGTCGT GGGCCGCTAC
CAGGACAAGC TGAACATCCG GTATTTCCGC CGCCCGTCGA ACCTCGGCTC GGCAGAAAAC
CTGAACCAGC TCTATCGCAG CGCGCAGGGC AAGTACGTGC TCTACCACGC CGATGACGAC
CTCCCGATCC TGGCCGAAAT CAACAACAAC ATCGACATCT TCGAGCGCAA CCCGGGCGTG
GATGTCATCT TTGCGCCGTG GTTCATTCAC GACTTGCCGA CGCGGCAGGA CGTCACCGCG
TTCTATCGCC AGGACGACAA CTACCTGATC GAGCAGCACG ACTACGCCAA GCTGCTGGCA
CTGGTGTTGT CGCACCACCT CTTTCCGGAG ATCTACCTGG CGCGCCGCGA GGTGATGGAC
CGCATCTACT TCAGCGCGCC GGAACCTGCG TTCTACGCCT TCGTGCACGC GGCCGAAATG
CTCGGCTCCA GCGCGGTGTA CTTCAGCAAG ACGCCGTTCT ATCGTTCGGT CTCGCGCTAC
TTTGCCGACG AGACCCGCGC CCAGGCCGGC AACGAAGAAG TGAAACACGC GTGGGACCGC
TATCGCGGTG GTCTCGAATA TCTGTTCGGC AAGTTCTCGC ACACGCTGCC GGCCGCCGAG
CGCCCCGAAT GGCTGAACGC CATCAACCAG TTCGTGCTGG CACGCATGAA GGTTGCGCTG
CGCCTGCGCA CGCATGAAGG CGGCAACTGG ATCGACAACT ACTACATCGC CAACCGCGTC
CGCGCGCTGG GTGAAGTGTC CGATCTTCCC GCACCGTATG ACCTGTACCG TGTCAACGCG
GCGTTCGAAT ACGTGACCAA GCTCGACCCG TTCAAGCCCG AGCCGCCCAA GTACGCCACG
CTGCGCCGCG CGCCGCTGCA GGTCTTCCAC CACGCGCACG GCTTTGCCGA CACGGAGTTC
CTGGTGCTCG ACGACGATGA CGCCATTCCG CATCACACCA TCGTCGTCAC GCCGATCCCG
ATGGACATTG CGGTGCCTGC CGGCCGCGAA GTCCGTTTCG TGTCGGAACT CGAAACGCTC
GCCAAATTCC CCTGA
|
|---|
| Protein sequence | MSEIEAIQTE ALQDIAPVKH DAVIQQVALS VCIPTYNRAR YLENLLAELV SQIGELKFSY
ELLIGDNCST DATEEVVGRY QDKLNIRYFR RPSNLGSAEN LNQLYRSAQG KYVLYHADDD
LPILAEINNN IDIFERNPGV DVIFAPWFIH DLPTRQDVTA FYRQDDNYLI EQHDYAKLLA
LVLSHHLFPE IYLARREVMD RIYFSAPEPA FYAFVHAAEM LGSSAVYFSK TPFYRSVSRY
FADETRAQAG NEEVKHAWDR YRGGLEYLFG KFSHTLPAAE RPEWLNAINQ FVLARMKVAL
RLRTHEGGNW IDNYYIANRV RALGEVSDLP APYDLYRVNA AFEYVTKLDP FKPEPPKYAT
LRRAPLQVFH HAHGFADTEF LVLDDDDAIP HHTIVVTPIP MDIAVPAGRE VRFVSELETL
AKFP
|
|---|
| |