Gene Rpic12D_3643 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_3643 
Symbol 
ID8021330 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012857 
Strand
Start bp203662 
End bp204234 
Gene Length573 bp 
Protein Length190 aa 
Translation table11 
GC content65% 
IMG OID644832433 
Productprotein of unknown function DUF1345 
Protein accessionYP_002983574 
Protein GI241665215 
COG category[S] Function unknown 
COG ID[COG4291] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGGTGC CGGCGGAGCG CGGATGGCTC ACGCGCACGC TGCTCGGCTG GGACGCCGCT 
GTCTGGACGT ACCTCGTCCT GATTTCCGGG ATGATGCTGC GCGCCGATCC GCGTCGCATA
CGCGCCGTGG CCCGCCGCGA AGACGAGCGT GCCTCGGCAG TGCTGGCCGT GGTGTGCCTG
GGCGTGGTCG CCAGCATGGT TGCGATTGCC TTTGAGCTGG CGACGGCCAG GTCGGCGGGA
CATGCGCAGG CATGGCACAC CGCTTTTGCC GGCGTGACGG TGCTGGGCGC GTGGCTGATG
GTGCCGATGA TGTTTACGGT GCACTACGCG CATCTGTACT ACCGGGCGCG CGACGAGCTG
CCCCTGCAGT TTCCCGATCG GGAGATCGAG CCCGATTACT GGGATTTCCT CTACTTCTCG
TTCACGATCG CGGTCGCGAG CCAGACGGCA GATATCAGCA TCCGCTCGCG TGCGATGCGC
AGAGCGGTGC TCGGGCAGTC GCTGCTGTCA TTCTTCTTCA ACACGAGCAT CCTCGCGCTT
TCCATCAACA TTGCTGCCAG CCTGTTTTCA TGA
 
Protein sequence
MLVPAERGWL TRTLLGWDAA VWTYLVLISG MMLRADPRRI RAVARREDER ASAVLAVVCL 
GVVASMVAIA FELATARSAG HAQAWHTAFA GVTVLGAWLM VPMMFTVHYA HLYYRARDEL
PLQFPDREIE PDYWDFLYFS FTIAVASQTA DISIRSRAMR RAVLGQSLLS FFFNTSILAL
SINIAASLFS