Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_3552 |
Symbol | |
ID | 8021239 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012857 |
Strand | - |
Start bp | 96082 |
End bp | 97626 |
Gene Length | 1545 bp |
Protein Length | 514 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 644832343 |
Product | methane/phenol/toluene hydroxylase |
Protein accession | YP_002983484 |
Protein GI | 241665125 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATACCC GTGTTGCCAA GAAGAAGCTT GGCCTGAAGG AACGCTACGC CGCCATGACC CGTGGCCTGG GCTGGGAAAC CACCTACCAA CCCATGGACA AGGTCTTCCC TTACGACACC TACGAGGGCA TCAAGATCCA CGACTGGGAC AAGTGGCAAG ACCCGTTCCG CCTGACCATG GATGCGTACT GGAAGTACCA GGGCGAGAAG GAGAAGAAGC TCTACGCCGT GATTGAGGCT TTCGCGCAGA ACAACGGCCA GCTCGGCATC AGCGATGCGC GCTACGTCAA CGCGCTCAAG CTGTTCATCC AGGGCGTCAC GCCGCTGGAA TACAACGCGC ACCGTGGGTT TGCTCACGTG GGCCGCCAGT TCACGGGCGA AGGTGCACGC GTGGCTGCGC AGATGCAGTC CATCGACGAA CTGCGTCACT ACCAGACCGA GACGCATGCG ATCTCGCACT ACAACAAGTA CTTCAACGGC ATGCACAGCC CGAACCACTG GTTCGATCGT GTCTGGTACC TGTCGGTGCC GAAGTCGTTC TTCGAAGACG CGTGCACGGC CGGCCCCTTC GAGTTCCTGA CGGCGGTCAG CTTCTCGTTC GAATACGTGC TGACCAACCT GCTGTTCGTG CCGTTCATGT CCGGCGCCGC GCACAACGGC GACATGAGCA CCGTCACTTT CGGCTTCTCT GCGCAGTCCG ATGAGTCGCG CCACATGACG CTGGGCATCG AGTGCATCAA GTTCATGCTG GAGCAGGACC CCGACAACGT TCCCATCGTT CAGCGCTGGA TCGACAAGTG GTTCTGGCGC GGTTACCGGC TGCTGACCAT CGTCGCGATG ATGCAGGACT ACATGCTGCC CAAGCGAGTG ATGAGCTGGA AGGAGGCCTG GGAGATGTAC GCCGAGGGCA ACGGCGGCGC GCTGTTCAAG GATCTGGCGC GCTATGGCAT CCGTGAGCCG GCGGGCTGGA AGGACGCCTG CGAAGGCAAG GACCACATCA GCCACCAGGC ATGGGCCACG TTCTACAACT ACGGCGCGGC CGCACCGTTC CACACGTGGG TTCCGAGCGA CGAAGAGATG CAATGGCTCT CGGAGAAATA CCCGGACTCC TTCGACACGC TGTATCGCCC GCGCTTTGAA TTCTGGCGCG AGCGGGCCGA GGAAGGACGC CGCTTCTACA ACAAGACGCT GCCGATGCTG TGCACGACCT GCCAGGTGCC GATGTTCTTC ACCGAACCGG GCGACGCCAC CAAGATCGCC TATCGCGAGA GCGACTACTT CGGCAACAAG TACCACTTCT GCTCGGACCA CTGCAAACAC ATCTTCGACG ATGAACCCGA GAAGTATGTG CAGAGCTGGC TGCCGGTGCA CCAGATCTAC CAGGGCCATT GCTTCCCGGA GGGTACCGAC CCGACAGCCG AAGGCTTCGA TCCGTTGATG GCCGTGCTCA AGTACTACGA GATGAACATC GGACGGGACA ACTTCGACTT CGAAGGCTCG GAAGACCAGA AGAACTTCGC CGCCTGGACA GGAGAATCAG CATGA
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Protein sequence | MDTRVAKKKL GLKERYAAMT RGLGWETTYQ PMDKVFPYDT YEGIKIHDWD KWQDPFRLTM DAYWKYQGEK EKKLYAVIEA FAQNNGQLGI SDARYVNALK LFIQGVTPLE YNAHRGFAHV GRQFTGEGAR VAAQMQSIDE LRHYQTETHA ISHYNKYFNG MHSPNHWFDR VWYLSVPKSF FEDACTAGPF EFLTAVSFSF EYVLTNLLFV PFMSGAAHNG DMSTVTFGFS AQSDESRHMT LGIECIKFML EQDPDNVPIV QRWIDKWFWR GYRLLTIVAM MQDYMLPKRV MSWKEAWEMY AEGNGGALFK DLARYGIREP AGWKDACEGK DHISHQAWAT FYNYGAAAPF HTWVPSDEEM QWLSEKYPDS FDTLYRPRFE FWRERAEEGR RFYNKTLPML CTTCQVPMFF TEPGDATKIA YRESDYFGNK YHFCSDHCKH IFDDEPEKYV QSWLPVHQIY QGHCFPEGTD PTAEGFDPLM AVLKYYEMNI GRDNFDFEGS EDQKNFAAWT GESA
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