| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_3525 |
|---|
| Symbol | |
|---|
| ID | 8021212 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12D |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012857 |
|---|
| Strand | - |
|---|
| Start bp | 69924 |
|---|
| End bp | 70310 |
|---|
| Gene Length | 387 bp |
|---|
| Protein Length | 128 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 644832317 |
|---|
| Product | Thioredoxin domain protein |
|---|
| Protein accession | YP_002983458 |
|---|
| Protein GI | 241665099 |
|---|
| COG category | [C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0526] Thiol-disulfide isomerase and thioredoxins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.513907 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAATTC TGCGCACAAT TTCTGGTCTT GCGCTGGCCG TCTCGGCTTC CGTGGCCATG
GCTGGCGAAA TCAAGCCCTA CACACCACAA GCCTTCGACC AACTCACCCA CGCGGGTAAG
CCCGTGATTG TCGACGTCAG TGCGACCTGG TGTCCCACGT GCAAGGCGCA ACGGCCCATC
GTTGAAAACC TCATGAAACA GGCGGCCTAC CTTGACGTGA CGGTCCTTGC TGTCGATTTC
GATACGAACA GGGCGGCCCT GAAGAAATTC AAGGTCAACA TGCAAAGCAC GCTCGTGGCC
TTCAAGGGGA CATCGGAAGT GGGGCGCTCG GTTGGAGATA CGACGCCGTC GGGCATCGAG
GACCTCATCA GAAAGACTGT CCATTGA
|
|---|
| Protein sequence | MKILRTISGL ALAVSASVAM AGEIKPYTPQ AFDQLTHAGK PVIVDVSATW CPTCKAQRPI
VENLMKQAAY LDVTVLAVDF DTNRAALKKF KVNMQSTLVA FKGTSEVGRS VGDTTPSGIE
DLIRKTVH
|
|---|
| |