| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_3504 |
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| Symbol | |
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| ID | 8021191 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012857 |
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| Strand | - |
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| Start bp | 49908 |
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| End bp | 52610 |
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| Gene Length | 2703 bp |
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| Protein Length | 900 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 644832297 |
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| Product | Integrase catalytic region |
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| Protein accession | YP_002983438 |
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| Protein GI | 241665079 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.661692 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTAGATA AGGCCCAACT TACCGAGCTT TTCGACCGGT TTAGTACTCC GCCGGCCGGT
CGTAAGCTCA TCTTGGATGC GCGCGTCCAA GCTCCTGTCC GTGACGTCAA GTCACGAGGG
GGGAATGTCA TCACCTTGTT AGCTAGTCGG AAGATGGGCG GCGACGTCGA AATTGCGACC
GAAAGCCGGC ACATCGAGTT CGCAGCGGCT GTTGGTCTGG AATACGACAA CAACGTACTC
GAGTTCTACA CGCAGCCGTG TCAGCTCAAG CTCGAACTGA TCGACGAGGC GACAGGGAAA
ACACACTCTT CCACGCATGT GCCGGACTTT CTGTCCATCC GGAACGACGG GTTCATGCTG
GAGGAATGGA AGTCAGACGT CAAACTCGAA CGGCTCGCAG AACGCTTTCC ATATCGCTAC
GTTAGGTCGA GTGATGGGCT GTGGCGGTCC CCTCAAATTG AGAGCCAGCT TGCCGAACTG
GGAATCCGAT ACCGAATCTT CAGCGACTCG GCGATGCCGC GCCGACGGGT TGAAAACCTG
CTTTATCTCG CCCATTACTT CGGCCCCGCA GCGGAGCCCT GCCCCGAAGA GGCGTTAGCG
CAGTTGCAAT TGGCTCTGCG TGAGCACGGA CACCTCACGT TCTCTGAGCT TCTTGCACCA
CCGTATGACT TCAGTGCTGA TTTGCTGAAC AAGGCAATTG CAGACAACTT GGTTGCTACG
GACCTCGATA GCGAGACGCT CACAGAAAAG CGCCTATTCA ATTTGTATCG CGACGATGTG
CTGCGTGACT TCATGGTGGC AAATGTCAAA TCGAGTGGCA CTTCTCCGCT GACGCCGTTC
GCTCTCGACA TCGCAGATGG CACCAAGTTC TTGTTCGAAG GGCAAGAGCT GACCATCGTC
GTGGTTGGCG AAGGTAGCGT GGTCTGCAAT AGGCCGGATG GCTCTTCAAT AACTCTCACT
CGCGAGTGGC TGCTTAGCGC GCATGAGAGG AACCACATCA CTGGAATTGA AAGCGCACGG
ACACAGAACC GGGGGCTGGG TAGCTATTCG AAAGAGCAGC TTACGACAGC GCTGCAACGG
CAGGCGCTGC TTGAATCGCC AGCACGCTCT TCCGGTGTCT CAGAGCGCTC TCTGCGGCGC
TGGTCTGCGC GGCAGAATGT TGCCAACGCG AACGGCGCCG ACAAAGTATT GGCCTTGGTG
CCCCATTGCA AACAGCGTGG AAACCGGAAG CGTCGTCTCA GCGACCTGCA GCTGGCAGTC
ATGGAACGAG TCATCGACGA ACACTGGCGA ACCAGCGAAG CAATCAACTA CAAGACATGC
TACCGCTTTC TCGTTGTGGC ATCTGAGAAA GAAGGGGTGA AATCGCCCTC ATACCCAACG
CTGATACAGC ACATCCAAGC TCTTGAGACC AACCGCGATG TTCGTGTGCG ACATGGGAAG
CGCTTGGCCT ACCTGCAGGA CACGTTTGTC GACGTTCTGT ACTACGACAC ACCTGTGCAC
GGAAGCCGTC CATTTCAATA CGTGCACATT GATCACACAC AGCTCGACAT CGAGGTCGTC
TCAAGTCGCA CGGGAGATGC ACTCGGGCGC CCCTGGCTGA CAGTTGCCAT CGACGCTTGG
TCTCGCCGCA TTCTGGCCTT TTACCTGACC TTCGACCCGC CGTCCTATAT CTCGGTAATG
ATGGCTATCC GCGACATGGT CCGCCGATTC AGTCGATTGC CCGAGTTCAT CGTTGTGGAT
AACGGAACGG ACTTTCTGTC AGACGCTTTC AAGACGTTCC TCCGCGCTAT GGGTACCCAT
TTGCGATTCA GGCCCGCAGG CCGTCCGCGC CACGGTGCCG TTCTGGAGCG CTTGTTTGGG
CGGCTGAATA CTGAGTACAT CCACAACTTA GCTGGCAATA CCAAGGCAAC AAAGAATGTG
CGAGCAGTGT CTGGCTCGCA TCTCCCCAAG AAACTGGCGC AGTGGACGCT GGAAGCCCTG
TATCGCGGCG TTGAATATTG GGCCACCGAG TACTACGACA ACGAGCCTCA CCAGGCGCTG
AATGAATCCC CTCGAGATGC GTTCCAGCGC GGCCTGCGCG AGAGTGGATT GCGGCCGCAG
CGGCAGGTGG TCTTCAACAG AGACTTTCTG ATCGCCACTT GCCCGCCGGT TGATCGCAAA
GGCACGCGCA TGGTCAATCA GCAGCGCGGC GTCAAGGTCG ACGATCGCTT CTATTGGAGC
GGCGTATTTA CGTCGCCCAA AGTCGCTGGC GCCAACATAC CTGTGCGCTA TGACCCCTGG
GATGCCTCGT CTGTCTACGT ACTGGTGAGA GACCACTGGC ACCACGCCGC CTGCCGAAAT
TTGTATGACC TCGGTCAATT GACCGAGGCG GAACAAAAGG CCTTCTCCGA AGAGTTTCGG
TCCCGTACGG GGACACGCCC GACCGACAAA GGCGCCGCTC AACGGCTGCG CGAGTTTATG
CGCATCTTCA CGCCGGAGGG TGCGATGGCC GTTCAGTTTG AACGCCAAGC CGAAAACAAG
GCGCTCTACA ACAGCCTGCA GATGTCGAGC GTTACACCCG TAATCGCTCC ACATCGATTC
GATTTTGAGG ACACAGCAAG TTCCACCACT TCGTCACGGC GGGACCAGAA AACAACAACT
GCACCGACGC CACCCCAACG CCCGGCAGTC TTGGGCGACT CCACTGAATT TGAAGACTTC
TGA
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| Protein sequence | MLDKAQLTEL FDRFSTPPAG RKLILDARVQ APVRDVKSRG GNVITLLASR KMGGDVEIAT
ESRHIEFAAA VGLEYDNNVL EFYTQPCQLK LELIDEATGK THSSTHVPDF LSIRNDGFML
EEWKSDVKLE RLAERFPYRY VRSSDGLWRS PQIESQLAEL GIRYRIFSDS AMPRRRVENL
LYLAHYFGPA AEPCPEEALA QLQLALREHG HLTFSELLAP PYDFSADLLN KAIADNLVAT
DLDSETLTEK RLFNLYRDDV LRDFMVANVK SSGTSPLTPF ALDIADGTKF LFEGQELTIV
VVGEGSVVCN RPDGSSITLT REWLLSAHER NHITGIESAR TQNRGLGSYS KEQLTTALQR
QALLESPARS SGVSERSLRR WSARQNVANA NGADKVLALV PHCKQRGNRK RRLSDLQLAV
MERVIDEHWR TSEAINYKTC YRFLVVASEK EGVKSPSYPT LIQHIQALET NRDVRVRHGK
RLAYLQDTFV DVLYYDTPVH GSRPFQYVHI DHTQLDIEVV SSRTGDALGR PWLTVAIDAW
SRRILAFYLT FDPPSYISVM MAIRDMVRRF SRLPEFIVVD NGTDFLSDAF KTFLRAMGTH
LRFRPAGRPR HGAVLERLFG RLNTEYIHNL AGNTKATKNV RAVSGSHLPK KLAQWTLEAL
YRGVEYWATE YYDNEPHQAL NESPRDAFQR GLRESGLRPQ RQVVFNRDFL IATCPPVDRK
GTRMVNQQRG VKVDDRFYWS GVFTSPKVAG ANIPVRYDPW DASSVYVLVR DHWHHAACRN
LYDLGQLTEA EQKAFSEEFR SRTGTRPTDK GAAQRLREFM RIFTPEGAMA VQFERQAENK
ALYNSLQMSS VTPVIAPHRF DFEDTASSTT SSRRDQKTTT APTPPQRPAV LGDSTEFEDF
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