Gene Rpic12D_3503 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_3503 
Symbol 
ID8021190 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012857 
Strand
Start bp48861 
End bp49898 
Gene Length1038 bp 
Protein Length345 aa 
Translation table11 
GC content56% 
IMG OID644832296 
ProductAAA ATPase 
Protein accessionYP_002983437 
Protein GI241665078 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATAAAC AAACTTACCC ATTGACCCCA GTAAAGGCTA GCGCCTCCAT CCTGCCAACC 
AAGCGCATCA AACACACCCG TGTTACGCAG GTGATGGACG AGCTGAGCAC TCTGATCTAT
CCGGATAGCC AAGAAAGCAT CCTGTTGGTG TGTGGCCCCA CCGGCGCCGG GAAAACGACG
CTTGCGAAGT TTATGGTAGA GAACGCACAC AGCCAGTCAC ACGCGGAAAT GGAGTTGAAT
GCAGGAGTGA TTCCGGCTAT CTATGTCCAA GCGCCAGCGT CAGGCGAGAC TAAGTTCTCA
TGGCGCCTGT TCTATCAGCG CATTCTGAAT CAGCTTGGCG ATGATCTCGA TTCTCCCAAG
GTGGCATATG GGGTGGATTC TCTCTCCGGC AGGCTTGTGC GTCCTCGTGG TACGAGCGGC
AATTCTCTAG CGGCGCTACG GACAGCAGTG GAGCGCGGCC TGCGAGCTCG GCAAGTACAG
TTCATGGTCA TCGACGAGGC CGCGCACATC TTTCGCGACA CACAGCGCAA TAGCAAGTTG
GAGGTCCAGC TCGATACGCT GAAGTCCCTG GTCAACGAGT GCGGCACTCA GATCGTCTTG
GTGGGCTCGT ATGACCTCTA CCACCTTGTG TCGTTGTCTG GCCAAATCGC GCGCCGCACC
CATGTGCTGC ATTTTGAGCG CTATCGCGAG GACTGTCCCG AGGGTGTTCA GGCGTTCGAG
CGTTGCCTTC TGTCCTTTGA TAAGGCTCTG CCGGAACTAT GGGGCGGCCA ATTGAACAGG
TACGCACAGC AACTTATGGC CAACACGCTG GGGTGTGTTG GAACGCTGAG CAGCGTGTTG
ACGCGCGCTG CGAGACTTGC TGAAGCCGAT GGGAATTGGT CGCTGGAAGC GCTGAAGCGA
GCTCTCTTGA ATGAAGCGCA ACATAAGCGG ATTCTTGAAG AAATCATTGA AGGCGAAGCG
GCCATCGGAC CAAGCCTGCC CCGTGTCTTG CCGACGATGC AACGCTCGAC AGCAAAAGCT
GAGAGGCTCA CAGCATGA
 
Protein sequence
MNKQTYPLTP VKASASILPT KRIKHTRVTQ VMDELSTLIY PDSQESILLV CGPTGAGKTT 
LAKFMVENAH SQSHAEMELN AGVIPAIYVQ APASGETKFS WRLFYQRILN QLGDDLDSPK
VAYGVDSLSG RLVRPRGTSG NSLAALRTAV ERGLRARQVQ FMVIDEAAHI FRDTQRNSKL
EVQLDTLKSL VNECGTQIVL VGSYDLYHLV SLSGQIARRT HVLHFERYRE DCPEGVQAFE
RCLLSFDKAL PELWGGQLNR YAQQLMANTL GCVGTLSSVL TRAARLAEAD GNWSLEALKR
ALLNEAQHKR ILEEIIEGEA AIGPSLPRVL PTMQRSTAKA ERLTA