| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_3377 |
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| Symbol | |
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| ID | 8021062 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | + |
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| Start bp | 3566605 |
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| End bp | 3568131 |
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| Gene Length | 1527 bp |
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| Protein Length | 508 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644832171 |
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| Product | Berberine/berberine domain protein |
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| Protein accession | YP_002983313 |
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| Protein GI | 241664953 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0277] FAD/FMN-containing dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACACTGG ATGTGACGCG CCAAGACCCT CGCTACAACA CGCTCAAACA TGGCTTCAAC
CTGCGCTGGC CGTCGACGGA CGCGCAGGCC GTGAGCCGCA TCGCCCTCAT TGAAAAACCC
GACGATGTGG CGCCCGCCGT GCAGCGCATC ATCAACGCGG GCCAGCGCCC GACCGTGCGC
AGCGGCGGAC ATTGCTACGA GGATTTCGTC TCCAACAACC CCGACGGCAC GATCGTCGAC
CTGAGCCTGC TCGGCACGCC CGAGGTGCGC GCCGACGGCT CGGTGCGCAT TCCGGCCGGT
ACGCAGAACT GGAACGGTTA CCTGGAGCTG TACAAGCGCC ACAACGTGAC GCTGCCTGGC
GGCTCCTGCT ATTCGGTGGG CGCGGGCGGG CATATCTGCG GCGGCGGGTA TGGGCTGCTT
TCGCGGCTGC AGGGGCTGAC GGTGGATTGG CTCTCGGCCG TGGACATCGT CACGGTCGAC
AAGACAGGCA AGGCCGCTGC CCGCACGGTG GATGCGGCGC ACGAACCGGA TCTTTTTCGT
GCGTGCCGCG GCGCGGGCGG CGGCAACTTC GGCGTCATCA CCGGCTACAC GTTCGCCAAG
CTGCCCACGG CACCGCAGGA AGTCACGCTC GCCACCGTGG CCTTCGACTG GGCCACCATG
ACGCCGCAGC GCTTTGCAGA ACTGCTGCGC ATCTACGGCG AATACTGGGA GACGCGCGGC
AAGGATCCGA ACACGTGGGG CATGTTCTCG CTGCTCAAAC TCACGCACAA ATCGTCGGGG
CAGATCGTGC TGCTCACGCA GTTCTGCAAC CCGGATGGCA CGTGTCGCGA CCTCTCTGTC
CTCAATGATT TTCTGAACCG CTTCCAGGCC TGCGCGCCCA CGCTGGTCAA AGGGCGCCCG
CCCGGCTACG GCCCCGCGCA CAAACAGGGC GTGGGGCAGC TGGTCTGCTC CAAGCCGCAC
ACCATCGTGC AATACGACTG GCTCACGGCC ACGCAGTATC TGAATGGCTC GGGGGCCAAT
CAGCGCGGCA AGTACAAATC GGCCTATATG AAGCGCGGCT TCACGGCGCG CGAGGCGCAG
CGCATCTACG CCCACCTCAC GCGGACGATG CCGGGCGTCG ATCTGAGCCA GTCGCTGCTG
CAGGTCGATT CGTACGGCGG CGCCATCAAC AAGGCCGAGC GCATTGGCGA CACCGCCGTG
CCGCAGCGGG CGTCGATCAT GAAGCTGCAG TACCAGACGT ACTGGACGTC TGCCGCCGAC
GATGCCGGCC ACCTGCGCTG GATCGGCGAT TTCTACCGTG ACGTCTACGG CGCCCCCGAC
GTGCCCGCGC CGCACAGCGG CACGCCGTAC CCCGGCGACC GGTACGAGGG CTGCTACATC
AACTACCCCG ACGTCGACAT GCTCGCCTAC CAGTTCTGGC CGCAGCTCTA CTACGGCAGC
GGCGACCTGT ACGCGTTTCT GCAGGACGTG AAGCGCCGGT ATGATCCGAA CAACATCTTC
CACCACGCGA TGTCCGTGCG TGTTTGA
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| Protein sequence | MTLDVTRQDP RYNTLKHGFN LRWPSTDAQA VSRIALIEKP DDVAPAVQRI INAGQRPTVR
SGGHCYEDFV SNNPDGTIVD LSLLGTPEVR ADGSVRIPAG TQNWNGYLEL YKRHNVTLPG
GSCYSVGAGG HICGGGYGLL SRLQGLTVDW LSAVDIVTVD KTGKAAARTV DAAHEPDLFR
ACRGAGGGNF GVITGYTFAK LPTAPQEVTL ATVAFDWATM TPQRFAELLR IYGEYWETRG
KDPNTWGMFS LLKLTHKSSG QIVLLTQFCN PDGTCRDLSV LNDFLNRFQA CAPTLVKGRP
PGYGPAHKQG VGQLVCSKPH TIVQYDWLTA TQYLNGSGAN QRGKYKSAYM KRGFTAREAQ
RIYAHLTRTM PGVDLSQSLL QVDSYGGAIN KAERIGDTAV PQRASIMKLQ YQTYWTSAAD
DAGHLRWIGD FYRDVYGAPD VPAPHSGTPY PGDRYEGCYI NYPDVDMLAY QFWPQLYYGS
GDLYAFLQDV KRRYDPNNIF HHAMSVRV
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