| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_3313 |
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| Symbol | |
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| ID | 8020997 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | + |
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| Start bp | 3490211 |
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| End bp | 3491941 |
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| Gene Length | 1731 bp |
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| Protein Length | 576 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644832106 |
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| Product | glucose-methanol-choline oxidoreductase |
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| Protein accession | YP_002983249 |
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| Protein GI | 241664889 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCAACG ATTTGCCCAC CTCGGCCCTC ACCTTCGATT ACGTCATCGT CGGCGCCGGT
TCGGCCGGTT GCGCGCTCGC CAGCCGGTTG ACCGAAGACC CGGACGTGAC GGTCGCGCTG
CTCGAAGCCG GCCCGCACGA TCATCACCTG TCAGTCTGGG TGCCGGCCGG TTGTGCGGCA
TCGCTGCCGT TCAAGAACAA GCGCAACTAT GGATTCCAGA CCGTGCCGCA AGCGGGGCTG
GGCGGCCGCC AGGGCTATCA GCCGCGCGGG CGTGGGCTGG GCGGCAGCTC GTCGCTCAAC
GCCATGATCT ACATCCGTGG CACGCCCAGC GACTACAACC ACTGGGCCGC GCTCGGCTGC
ACCGGCTGGA GTTGGAGCGA TGTGCTGCCC TACTTCAAGC GCTCCGAAGG CAACGAGCGG
TTTGCCGGCC GCGATGACGA CGCGCTGCAC GGCGGTACCG GCCCGCTGCA CGTGAGCGAC
CTGCGCACCG GCAACCCGAT CGCCCAGCGC TTTGTCGAGG CCGGCGTGGC GGCAGGCTAC
CGCCTCAACA ACGATTTCAA CGGCCCCGAC CAGGAAGGCG TCGGTCCGTA CCAGGTGACG
CAATACAACG GCGAGCGCTG GAACGCCGCA CGTGCCTACC TGCACGGCGG CGACAAGGCT
GATGCCACGT TCAGCCGCAA TCGCCGCCAA CTGACGGTGA TGCCCGACAC GCAGGCCCTG
CGCATCGTCT TTGAAGGCAA GCGCGCGGCA GGCGTGGTGG TGGAGCGCGC GGGCCGCACA
GAAACGTTGC GCGCGCGCCG CGAGGTGATC GTCTCATCGG GCGCGTTTGG GTCGCCGCAG
TTGCTGATGG CCTCGGGCGT GGGCCCGGCG GAGCATCTGC GCTCGCTGGG CATTCCGGTC
GTACACGACC TGCCCGGCGT CGGGCAGAAC CTGCAGGACC ACCTCGACAT CATCCTGCAC
AAGAAGGTCT TCAACCTGGA TTTGATCGGC TATTCCGCGC GCGGCAGCGC CCGCATGCTG
AGCGAGATCC TGCGCTACCG GCGCGAGCGT CGCGGCATGC TGGCAACCAA CTTTGCTGAA
GCCGGCGGCT TCATCAAGAG CCGGCCCGAT CTGGCCGATC CCGATCTGCA ACTGCACTTC
GTTGTCGCCA TGGCCGACAA CCACAACCGC ACGTTCAACT ACGGCCACGG CTATTCATGC
CACGTGTGCG TGCTGCGCCC AAAGAGCCGC GGCGAAGTGC GCCTGGCCTC CGCCGACACG
CGCGACGCAC CGCTGATCGA CCCGCGTTTC CTGTCCGACC CCGACGACAT GAACGGCATG
CTTGCCGGCT TCCGCGCCGT GAAGAGCATC TTCGCGCAGC GCCCGCTGGC CGACCTGGGC
GGCCGTGAGT TGTATTCGGC AAACATCCGC GGCGATGGCT CCGACGACGA AGCCGTCCGC
GCCCTTATCC GCCAGCACGC CGACACGATC TACCACCCCG TCGGCACCTG CAAGATGGGC
AGCGCAGACG AAGCAATGGC CGTCGTCGAC CCGGAACTGC GCGTGCGCGG CGTCACGGGC
CTGCGCGTGA TCGACGGCTC GGTCATGCCA ACGCTCATCG GCGGCAACAC CAACGCCCCA
ATCATCATGA TTGCCGAGCG CGCCGCCGAC CTAATGCGTC AAGGCGGACG CCCGACGCTG
AATGTGGTGA GCAGCATCGC GGCGCAGGCA GCACCGGCGG AGGTGCACTG A
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| Protein sequence | MANDLPTSAL TFDYVIVGAG SAGCALASRL TEDPDVTVAL LEAGPHDHHL SVWVPAGCAA
SLPFKNKRNY GFQTVPQAGL GGRQGYQPRG RGLGGSSSLN AMIYIRGTPS DYNHWAALGC
TGWSWSDVLP YFKRSEGNER FAGRDDDALH GGTGPLHVSD LRTGNPIAQR FVEAGVAAGY
RLNNDFNGPD QEGVGPYQVT QYNGERWNAA RAYLHGGDKA DATFSRNRRQ LTVMPDTQAL
RIVFEGKRAA GVVVERAGRT ETLRARREVI VSSGAFGSPQ LLMASGVGPA EHLRSLGIPV
VHDLPGVGQN LQDHLDIILH KKVFNLDLIG YSARGSARML SEILRYRRER RGMLATNFAE
AGGFIKSRPD LADPDLQLHF VVAMADNHNR TFNYGHGYSC HVCVLRPKSR GEVRLASADT
RDAPLIDPRF LSDPDDMNGM LAGFRAVKSI FAQRPLADLG GRELYSANIR GDGSDDEAVR
ALIRQHADTI YHPVGTCKMG SADEAMAVVD PELRVRGVTG LRVIDGSVMP TLIGGNTNAP
IIMIAERAAD LMRQGGRPTL NVVSSIAAQA APAEVH
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