Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_3278 |
Symbol | |
ID | 8020962 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | - |
Start bp | 3461735 |
End bp | 3462169 |
Gene Length | 435 bp |
Protein Length | 144 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 644832073 |
Product | thioesterase superfamily protein |
Protein accession | YP_002983216 |
Protein GI | 241664856 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG2050] Uncharacterized protein, possibly involved in aromatic compounds catabolism |
TIGRFAM ID | [TIGR00369] uncharacterized domain 1 |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCATCCGT CCCAAATGAC CGGCCTGCAA CTGCTGCAGG CCATGTCGCA CGGTGATCTC CCGCGCGCGT CCATCAGCGA AACCATCCCG ATGACGATGG ATGTCATCGA AGCAGGCACC GTGCACTTCG GTGCCCAGGC CGACAAGCGC CACCTCAATC CGCTGGGCGG TGTGCACGGT GGCTTTGCGG CGACGGTGCT CGACTCCGTG ACCGGCTGCG CCGTGCATTC GATGCTCGAA GCCGGCGTCG GCTACGGCAC GGTTGACCTG AACGTGAAGA TGGTGAAGGC TGTGCCGGTC GATACGCCGC TGGTGGCCGT TGGGCGCGTG CTGCATGTCT CGCGCACGAT CGGCGTGTCG GAGGGCACGC TCAAGACCCA GGACGGCACG TTGCTGGCGC ATGCCACGGC AACGTGTGTC ATCCGCCGTC CGTAA
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Protein sequence | MHPSQMTGLQ LLQAMSHGDL PRASISETIP MTMDVIEAGT VHFGAQADKR HLNPLGGVHG GFAATVLDSV TGCAVHSMLE AGVGYGTVDL NVKMVKAVPV DTPLVAVGRV LHVSRTIGVS EGTLKTQDGT LLAHATATCV IRRP
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