Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_3256 |
Symbol | |
ID | 8020940 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | + |
Start bp | 3437401 |
End bp | 3438108 |
Gene Length | 708 bp |
Protein Length | 235 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644832051 |
Product | major intrinsic protein |
Protein accession | YP_002983194 |
Protein GI | 241664834 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0580] Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTCGAAC TGCGCAGCCG GCTCACCGCC GAAGCACTGG GTACGGCGCT GCTGCTGGCC ATCGTGATCG GCTCCGGGAT CATGGCCGAA CGCCTGTCTG GCGGAAACGT CGCGATCGCG TTGCTTGCCA ACACGGCCGC CACGGTGGGC GGGCTCTACG TGCTGATCGA AGCCTTGGGG CCCATCAGCG GGGCGCACTT CAATCCGGTG GTGAGCGCTG TGATGGCGGC GCGTGGCGAG CTGCCCGGCG CCGCCCTGCT GCCGTACATC GTTGCGCAAA TGCTGGGCGC GGCGCTGGGC GCATGGCTGG CGCACGCCAT GTTCGACATG ACCCTGCTGC AGTTCTCCAC CAAGGTGCGC AGCGGCACGG GGCAGTGGAT TGCCGAAGCG GTGGCCACCG CCGGCCTGCT GCTCGTCATC CTGCGGGCGC CCAACGGGCG GGCTGCATCG ACGGTGGCGG CGTACATCGG CGCGGCGTAC TGGTTCACGG CGTCGACATC GTTCGCCAAC CCGGCGGCCG CGTTCGGGCG CATGTTCAGC AACAGCTTTG CCGGCATCGC GCCCGGCAGC GTGCCGGGGT TTGTGCTGGC CGAATGCGCA GGCGCCGTGC TGGGCGTGCT GCTGCACAAC CTGCTTGAAC CGCGCCTTGT TGCGAGCAGC CATCCCAACG TCATCGAATC GTCGGGCGAG CATCCGCCGC AGACGTAA
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Protein sequence | MVELRSRLTA EALGTALLLA IVIGSGIMAE RLSGGNVAIA LLANTAATVG GLYVLIEALG PISGAHFNPV VSAVMAARGE LPGAALLPYI VAQMLGAALG AWLAHAMFDM TLLQFSTKVR SGTGQWIAEA VATAGLLLVI LRAPNGRAAS TVAAYIGAAY WFTASTSFAN PAAAFGRMFS NSFAGIAPGS VPGFVLAECA GAVLGVLLHN LLEPRLVASS HPNVIESSGE HPPQT
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