Gene Rpic12D_3256 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_3256 
Symbol 
ID8020940 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp3437401 
End bp3438108 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content69% 
IMG OID644832051 
Productmajor intrinsic protein 
Protein accessionYP_002983194 
Protein GI241664834 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0580] Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCGAAC TGCGCAGCCG GCTCACCGCC GAAGCACTGG GTACGGCGCT GCTGCTGGCC 
ATCGTGATCG GCTCCGGGAT CATGGCCGAA CGCCTGTCTG GCGGAAACGT CGCGATCGCG
TTGCTTGCCA ACACGGCCGC CACGGTGGGC GGGCTCTACG TGCTGATCGA AGCCTTGGGG
CCCATCAGCG GGGCGCACTT CAATCCGGTG GTGAGCGCTG TGATGGCGGC GCGTGGCGAG
CTGCCCGGCG CCGCCCTGCT GCCGTACATC GTTGCGCAAA TGCTGGGCGC GGCGCTGGGC
GCATGGCTGG CGCACGCCAT GTTCGACATG ACCCTGCTGC AGTTCTCCAC CAAGGTGCGC
AGCGGCACGG GGCAGTGGAT TGCCGAAGCG GTGGCCACCG CCGGCCTGCT GCTCGTCATC
CTGCGGGCGC CCAACGGGCG GGCTGCATCG ACGGTGGCGG CGTACATCGG CGCGGCGTAC
TGGTTCACGG CGTCGACATC GTTCGCCAAC CCGGCGGCCG CGTTCGGGCG CATGTTCAGC
AACAGCTTTG CCGGCATCGC GCCCGGCAGC GTGCCGGGGT TTGTGCTGGC CGAATGCGCA
GGCGCCGTGC TGGGCGTGCT GCTGCACAAC CTGCTTGAAC CGCGCCTTGT TGCGAGCAGC
CATCCCAACG TCATCGAATC GTCGGGCGAG CATCCGCCGC AGACGTAA
 
Protein sequence
MVELRSRLTA EALGTALLLA IVIGSGIMAE RLSGGNVAIA LLANTAATVG GLYVLIEALG 
PISGAHFNPV VSAVMAARGE LPGAALLPYI VAQMLGAALG AWLAHAMFDM TLLQFSTKVR
SGTGQWIAEA VATAGLLLVI LRAPNGRAAS TVAAYIGAAY WFTASTSFAN PAAAFGRMFS
NSFAGIAPGS VPGFVLAECA GAVLGVLLHN LLEPRLVASS HPNVIESSGE HPPQT