Gene Rpic12D_3247 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_3247 
Symbol 
ID8020931 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp3429231 
End bp3430604 
Gene Length1374 bp 
Protein Length457 aa 
Translation table11 
GC content65% 
IMG OID644832042 
ProductABC transporter related 
Protein accessionYP_002983185 
Protein GI241664825 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1116] ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTACCA CCAGCACCCA TAGCCAGAAC GCTGAAAGCG TCATGGAGCT GCGCGGCGTC 
TCGAAGATCT TCCGCACCGC AGACCACACA GACCGTGCCG TGCTCGAAGG CGTGGACCTC
AACCTGCGCC AGGGCGAGAT CGTCGCCATG CTGGGCAAAT CCGGCTCGGG CAAATCGACG
TTGCTGCGCA TCATGGCGGG TCTGGTGCGC GCCGATCGCG GGCAGGTGCT GTTTCGTGGG
CGTGAATACT CCGGCCCCGT GCAGGGCATT GCGATGGTGT TCCAGTCGTT TGCGCTGTTT
CCGTGGCTGA CGGTGCAGCA GAATGTGGAG CTGGGCCTGG AGGCGCAAGG CGTGTCCAAG
GCCGAGCGTG AAGAGCGCGC CGAACAGGCC ATCGACCTGA TCGGCCTGTC CGGCTTCAAC
AGCGCCCTGC CACGCGAACT CTCCGGTGGC ATGCGCCAAC GTGTGGGCAT TGCGCGCGCG
CTGGTGACCG AGCCCGACCT GCTGCTGATG GACGAAGCGT TCTCGGCCCT CGACGTGCTG
ACCGGCGAAA ACCTGCGCGA CGAAATGCTC GACCTGTGGG AAGACCGCCG CACCAATATC
AAGAGCATCC TGATTGTCTC GCACAACATT GAAGAGGCGG TGATGATGGC GGACCGCATC
GTCATCCTCT CGAGCGATCC GGGGCGTATC CGCGCCGAGG TGCGTGTGCC GTTCCCGCGC
CCCCGCAACC GAGATTCCGC CGCGGTGCGC AACCTTATCG ACGAAGTGTA TGGGCTGATG
ACATCGCCGG AGCGCGTGGG CGTGCATGTG GGCGTGGAGC CCGCTGCCGA GCAGCTTGCC
TACCGCCTGC CCGATGCCGA GATCGGCCAG ATGGAGGCCA TCCTGGACCT GCTGGTCGAA
GCGCCGTTCA ACGGCCGCGC CGACCTGCCA CACCTGGCAG AAGAAGCCGG CGTGACCGAC
GACGACCTGC TGCCCGCCTG CGAAGCGCTG GCGCTGCTGC AACTGGCCAC CATCGAGCGC
GGGGACATCA TCGTCACGCC GTTCGGCAAG ACCTACATGG AAACCGAACC GCCCGAGCGC
AAGGTGCTGT TCGGCCAGAA GCTGCTGGAA CGCGTGGCCC TGGCCGCGCA CATCCGCGCC
GAGCTGGAAG CCAACGAAGA CGGCGAGATC CGCGAAGAGC ATGTGCTGCG CGAACTTGAG
GCGTACCTCA AGCCCGAAGA AGCCGAGCGC GTGCTCAAGA TCGGCATCGA ATGGGGCCGC
TACGGCGAGG TGTACGAGTA CGTGTACAAC ACCGGCATGC TCACCCTGCC CCGTGAAGAG
CGCGAGGAAC GCGAAGAGCG TGAGGCGCAG GACGGTGGGG ATAACGCGCA GTAA
 
Protein sequence
MVTTSTHSQN AESVMELRGV SKIFRTADHT DRAVLEGVDL NLRQGEIVAM LGKSGSGKST 
LLRIMAGLVR ADRGQVLFRG REYSGPVQGI AMVFQSFALF PWLTVQQNVE LGLEAQGVSK
AEREERAEQA IDLIGLSGFN SALPRELSGG MRQRVGIARA LVTEPDLLLM DEAFSALDVL
TGENLRDEML DLWEDRRTNI KSILIVSHNI EEAVMMADRI VILSSDPGRI RAEVRVPFPR
PRNRDSAAVR NLIDEVYGLM TSPERVGVHV GVEPAAEQLA YRLPDAEIGQ MEAILDLLVE
APFNGRADLP HLAEEAGVTD DDLLPACEAL ALLQLATIER GDIIVTPFGK TYMETEPPER
KVLFGQKLLE RVALAAHIRA ELEANEDGEI REEHVLRELE AYLKPEEAER VLKIGIEWGR
YGEVYEYVYN TGMLTLPREE REEREEREAQ DGGDNAQ