Gene Rpic12D_3204 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_3204 
Symbol 
ID8020888 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp3388139 
End bp3388690 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content64% 
IMG OID644832000 
Productmetal dependent phosphohydrolase 
Protein accessionYP_002983143 
Protein GI241664783 
COG category[R] General function prediction only 
COG ID[COG4341] Predicted HD phosphohydrolase 
TIGRFAM ID[TIGR03276] phosphonate degradation operons associated HDIG domain protein 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCCTGA CTCTCGACGA CATCCGCACG CTATTCGATC GCCACGGCAA CATTGCCTAC 
AGCGGCGAGC CCGTCACTCA GTTGGAACAT GCCTTGCAGA CGGCGACGCT GGCGGAGGCG
GCCGGCGCGT CGGATGTGCT GGTCACGGCG GCGCTGCTGC ACGACCTCGG TCATTTGCTG
AACCTGCAGG GCGAGACGCC GACCGCCCAC GGCATCGACG ATCAGCACCA GTACTTTGCG
CTGCCGTTTC TGCGTGCGAC GTTTCCCGAT GCCGTGCTGG AGCCGATCCG CCTGCATGTG
GATGCCAAGC GCTGCCTGTG CGCGATGGAC GCGCATTACT ACGCACGCCT ATCAGCGGAT
TCGGTACGCA GCCTGGCGTT GCAGGGCGGC GTGTTTTCGA CACACGAGGC CGAGGCCTTC
ATGCAGCGTC CATACGCTGC CGATGCGCTG CAATTGCGCC AGTGGGATGA CCTCGCCAAG
GTGGCCGGGC AGCGCACACC TAAACTTGCT CACTTCCTTG CCACGGCCGC GCGGGTTTTA
GTGGCAGCCT AG
 
Protein sequence
MALTLDDIRT LFDRHGNIAY SGEPVTQLEH ALQTATLAEA AGASDVLVTA ALLHDLGHLL 
NLQGETPTAH GIDDQHQYFA LPFLRATFPD AVLEPIRLHV DAKRCLCAMD AHYYARLSAD
SVRSLALQGG VFSTHEAEAF MQRPYAADAL QLRQWDDLAK VAGQRTPKLA HFLATAARVL
VAA