| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_3185 |
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| Symbol | |
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| ID | 8020869 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | + |
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| Start bp | 3368405 |
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| End bp | 3370804 |
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| Gene Length | 2400 bp |
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| Protein Length | 799 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644831981 |
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| Product | putative prolin-rich transmembrane protein |
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| Protein accession | YP_002983124 |
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| Protein GI | 241664764 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.702606 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCAAGG TTTCCCGTCG TTCCCCTCTC TGCTCCGGTG TACGGCTGCC GCACGTGTTG
CGCGCGGTGG GGGTTGCCGC CGTATTGCTG GTCTGTGGTG CGCAAGCTGC GATGGCCGCC
GACCCGGCTT CGCGGGTGGC TCGGCTGTCG GACTTTTCGG GCACGGTGAG CTTCGCGCCC
GCGGGTTCCG ACGACTGGGC GGGCGCCTCG CTCAACCGCC CGCTCACCAC GGGAGATCGC
CTGTGGTCGG ACCAGGGTAG CCACACCGAA CTCCACGTCG GCTCCACGGC GCTGCGCCTC
GGGCAGAACA CCGGCGCCAC ACTGGTCGAC CTGGACGACC GCAACACGCA GGTAAAGCTC
ACGCAAGGCG CGCTGTCGGT ACGCGTGCGG TCGCTGCCGG CCGACCAGAC CATCGAGATC
GATACACCCA ACCTGGCGTT CACGCCCCAG GCACCGGGCG AATACCGTCT TGACGTCGCC
CCGGATGGTT CCAGCACGAC CGTCACTGTG TGGCACGGTC AAGGCACCGC CTACGGCGAC
GACCGCTCGA CCCCGCTGGG CGCGGGTCAA CAAATCCGGT TTGGCGGCAC GGACCTCGCC
GAGGCCGGTG GCACCGACAA TCCCAGTCGC GACGCCTTCG ACCGCTGGGC CGAATCGCGC
GACGCCCGCG AAGACGCTTC CGTGTCCGCC CGCTACGTCG GCCGCGAAAT GACCGGCTAC
GAAGCCCTCG ACGACAACGG CACATGGCGT GAAGAAGACG GCTACGGCGC CGTGTGGGTG
CCGCGCGCCG TACCCGTCGG CTGGGCACCG TATCGCACAG GCCATTGGGC CTGGGTTGCG
CCGTGGGGCT GGACGTGGGT GGACGACGCG CCGTGGGGCT TCGCCCCCTT CCACTACGGC
CGCTGGGCGT ACGTCGGCTC GACCTGGTGC TGGGTACCGG GGCCGGTCGT GCCCCGGCCC
GTCTATGCGC CGGCGCTCGT CGGCTTCGTG GGCGGCGGAG GCGGCGGCGG CGTGAGCTGG
GGGATCAACA TCTCGATCGG CTCACCCGGG GTGGCATGGT TCCCCCTGGC GCCGGGCGAG
GCGTATCGCC CGGTGTATGC GGCCAGCCCG ACCTACGTGA CGAACATCAA CCGCACGGTG
GTGGTGAACA ACGTCACGGT CAACAAGACC ATCATCAACA ACACCACCAA CGTGACCAAC
GTTCGCAACG AGAACCGCGT CACCTATGTC AATGCCAACA ACCCAGCCGC ACTGACGGCT
GTGCCCGCCA AGACCTTCGT CAACGGCCAG CCGGTCGGTC CGGCCATGAC GCATCTGCGA
CCGGAGCAAT TGCGCGCGCA GATGGCGCAT GCGCAGTTTG TGTCGACGCC GGCGCTGGCA
CCGGTGCGTG CCAGCCTTGT GGGCGCAGCA GCCAACGGCG GGCCGCACCA GTTGCCGCCG
CCGCAGGCAT TTGCACGGCA GGCGATCGCG GTGCGCGCGC CTGCCGTGCC GGCAGGCGGG
CACGATGCGT TGGCAGAGCG GTTCCGCTCA CAGGGCGGTG CGCTGCCGGG CGCTGGCCCG
GCGTGGACGG GCGGCAACGT GAGCCCCCGC ATCGCGCCCG TGCGAGGTCA AGCCAGTGCC
GGAATGCCGC CCGCTCCCAT AGCTGCGCAG GCAGCGGGGC TCCGTTTGAG TCGCGCCGCG
CAGAATGGGC AGAGTGGGCC TGCACGCGCC GGCGGCGAGC CTGGCCGACC GCCGGAGCAG
CACGGTGCGA ACGGGCCACA AGGTTTGATC GGCTCGCCGA ACCCGGAAGG TGCGCAGCCA
CAGCACGGCG GCCAGCCGGG GCCGGGCCCG CAGACGCTGA TGGCGCCGGG CTCCACCAAT
CGTCCGCGCC CGCAGCCGGG CGCCGCTGCG CCGCAGGAGC GCCCTGCCCA ACCGCAGACC
GCGCAGACAC CGCAAGGCCC CGCCGGCATG ACGACACGCC CGCCGCAGCG CGAAGGCGCA
CCCGGTACGC CGCGTGACGA ACGCCACGCC TTTGAGCCGC GCCCACAACT GCCGCAAGCA
CCGCAACCTC AGCCTCAATC GCAGCGCGGT GGCCAGGAGC CGAATCGTTT CAACGGCAAC
CCGGCAGCGA CCCTGCAGGA GCGCCCGCAC AACGAGCCGC CGCAGATGCG CGCGCCCCGC
GAGCCGGAGC AGCGCCGGCC GGAACCCCGC ATGGAAGCAC CGCGTCCTGC GCCGCAGCCG
CAGCCGCAGC CGCAGCCGCA CGGCGAGATG CGCCCGCCGC AACCGCAGCC CCAACCGCGT
CCCCCTGAAG CGCGCCCGCC GCAACCTCAG GCGCAGCCGC CTCGCCAGGA GCACCACGAA
GGCCAACCGC ATCCGCAAGG GAATCGCGGT GAAGAGAAAC GCGAAGGCGA GCACCGCTGA
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| Protein sequence | MSKVSRRSPL CSGVRLPHVL RAVGVAAVLL VCGAQAAMAA DPASRVARLS DFSGTVSFAP
AGSDDWAGAS LNRPLTTGDR LWSDQGSHTE LHVGSTALRL GQNTGATLVD LDDRNTQVKL
TQGALSVRVR SLPADQTIEI DTPNLAFTPQ APGEYRLDVA PDGSSTTVTV WHGQGTAYGD
DRSTPLGAGQ QIRFGGTDLA EAGGTDNPSR DAFDRWAESR DAREDASVSA RYVGREMTGY
EALDDNGTWR EEDGYGAVWV PRAVPVGWAP YRTGHWAWVA PWGWTWVDDA PWGFAPFHYG
RWAYVGSTWC WVPGPVVPRP VYAPALVGFV GGGGGGGVSW GINISIGSPG VAWFPLAPGE
AYRPVYAASP TYVTNINRTV VVNNVTVNKT IINNTTNVTN VRNENRVTYV NANNPAALTA
VPAKTFVNGQ PVGPAMTHLR PEQLRAQMAH AQFVSTPALA PVRASLVGAA ANGGPHQLPP
PQAFARQAIA VRAPAVPAGG HDALAERFRS QGGALPGAGP AWTGGNVSPR IAPVRGQASA
GMPPAPIAAQ AAGLRLSRAA QNGQSGPARA GGEPGRPPEQ HGANGPQGLI GSPNPEGAQP
QHGGQPGPGP QTLMAPGSTN RPRPQPGAAA PQERPAQPQT AQTPQGPAGM TTRPPQREGA
PGTPRDERHA FEPRPQLPQA PQPQPQSQRG GQEPNRFNGN PAATLQERPH NEPPQMRAPR
EPEQRRPEPR MEAPRPAPQP QPQPQPHGEM RPPQPQPQPR PPEARPPQPQ AQPPRQEHHE
GQPHPQGNRG EEKREGEHR
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