Gene Rpic12D_3182 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_3182 
Symbol 
ID8020866 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp3365093 
End bp3366040 
Gene Length948 bp 
Protein Length315 aa 
Translation table11 
GC content66% 
IMG OID644831978 
ProductAlpha/beta hydrolase fold-3 domain protein 
Protein accessionYP_002983121 
Protein GI241664761 
COG category[I] Lipid transport and metabolism 
COG ID[COG0657] Esterase/lipase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGTCG ATCCGCACAT CCTGCAGTTC TACCAACGTC TTGCCGACCA GTTCGGCGCC 
TTGCCGCCAC CTGAAGATGC CGTCGCACAG CGCGCGCGAT TCGAGGCGAT CGCGGCTGTG
TCCGATCGTC CCGATCCTGA CGGCGTTGAA GTTTCCGATC TCAGCCTGCC GCTTGCCGGG
CGCACGCTGG ACGCCATCGT CTTTCGTCCG AAGGGTGTGG CAACGCCGCG TTTGCTGGTG
TGGTTTCACG GTGGCGGATG GGTGGTCGGC GCACCGCGCA CAACGCACCG CATGCTTGCT
GCATTGCTGG CGCTGGACAC GCGTTGCGCC GTGGTGAGTG TCGATTACCG CCTTGCGCCC
GAGCACGCGT TTCCCACGCC GGCCGACGAT GCACGCGACG CGCTCGCGTA TCTGGCGGAG
CAGCGCGCGC ACCTCGGCTT CGATCCGGAC TTCATCGCGG TGGGCGGCGA CAGCGCGGGC
GGCCATCTCG CGGTGCAGGC TGCGCAGGGC ATGCGTCCTG GTCTCGTCAA CGCGCAGTTC
CTGCTGTACC CCGTCACCAC GCCGGCTTTC GGCAGCGAGA GCTACAACGC GTTTGCACAA
GGCCCGGGCC TCACACGCGA TGAAATGCGC TGGTACTGGG AGAAATACAT CGGCGCAGAA
GCGCTCGCCA AACCGCTCGC CGAGCAGGAC CCCCGCATCT TCCTGATGGC ACGCCCGCCG
GCCTATACGC CGCCCGATAC GGTCGTCATC GTGGCCGCGC ACGATGTGCT GCGCGACGAC
GGCCTGCAAT ACGCCGACTA TCTCGTGCAG CATGGCGCGC AGGTCATCAC CATCGAGGCG
TCGGGCATGA CACACGCTTT CGCGCGAATC CAGTTCGAGG CAGAGCGCGC ACGCGAGTGG
ATGCGCCGCG CGGCGCATGC ATTCGTCGGG ATGATCAGCG AGGAATAA
 
Protein sequence
MAVDPHILQF YQRLADQFGA LPPPEDAVAQ RARFEAIAAV SDRPDPDGVE VSDLSLPLAG 
RTLDAIVFRP KGVATPRLLV WFHGGGWVVG APRTTHRMLA ALLALDTRCA VVSVDYRLAP
EHAFPTPADD ARDALAYLAE QRAHLGFDPD FIAVGGDSAG GHLAVQAAQG MRPGLVNAQF
LLYPVTTPAF GSESYNAFAQ GPGLTRDEMR WYWEKYIGAE ALAKPLAEQD PRIFLMARPP
AYTPPDTVVI VAAHDVLRDD GLQYADYLVQ HGAQVITIEA SGMTHAFARI QFEAERAREW
MRRAAHAFVG MISEE