| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_3170 |
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| Symbol | |
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| ID | 8020854 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | - |
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| Start bp | 3346420 |
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| End bp | 3347565 |
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| Gene Length | 1146 bp |
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| Protein Length | 381 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644831966 |
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| Product | Extracellular ligand-binding receptor |
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| Protein accession | YP_002983109 |
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| Protein GI | 241664749 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATTGA AGCAACTGTG GGTGGCGGCA GCACTGTGCG CGCTGGCGGG TGGTGCAATG
ACGGCCGCAT CGGCCCAGGA AGTCATCAAG CTGGGCTTTG CTGCCCCGAT GTCGGGTCCG
CAAGCGCAAT ACGGCACGGA CATGAAGAAC GGCGCGACCC TGGCCATCGA AGAGTTCAAT
GCCACGCACC CGAAGATCGC CGGCAAGGAA GTCAAGTTCC AGCTCATGGC AGAAGACGAC
CAGGCTGACC CGAAGACCGG TACGGCAGTC GCCCAGAAGC TGGTGGACAG CGGCATCAAG
GGCATGCTCG GCCACTTCAA TTCGGGTACC AGCATCCCGG CGTCGCGCGT GTACAACCAA
GCCGGCATCG CGCAGATCGC CATGGCAACC GCGCCGGAAT ACACCAAGCA GGGCTACAAG
ACGACGTTCC GCATGATGAC TTCCGACACC CAGCAGGGTT CGGTGGTCGG CACGTTCGCC
GTCAAGAAGC TGGGCTACAA GAACATCGCC ATCGTGGATG ACCGCACGGC CTACGGCCAG
GGTCTGGCCG ACGAGTTCGA GAAGGCTGCC AAGGCCGCCG GCGCCACCAT CGTGCGTCGC
GAATTCACGA ACGACAAGGC CAGCGACTTC AAGGCGATCC TCACGCAGAT CAAGAGCAAG
AACCCGGATG CCGTGTTCTA CGGTGGCGCC GAAGGCCAAT CGGCGCCGCT GCTCAAGCAG
ATGCGCGAGC TGGGCATGAA GTCCACGCTG ATGTCGGGCG AAATGTCCAA GACCGACGAC
TTCATCAAGC TGGCCGGCCC GCAAGCCGCG GAAGGCATGG TGGCATCGCT GGCCGGTCTG
CCGCTGGAGC AGATGCCGGG CGGCGCTGGC TACAAGGCCC GCTATGAGAA GCGTTTCGGC
ACGCCGGTGC AGACGTACTC GCCGTACGCC TACGACGGCG CGATGGCCCT GATGAAGGCG
ATGGTGGCTG CCGGTTCGTC CGACCCGGCC AAGTACCTGC CCATCCTGGC TGCCACGAAC
ACGCAAGGCG TGACCGCGAA GCACTACGCC TATGACGACA AGGGCGACCT GAAGGATGGC
GGCATCACCG TCTACAAGGT CACCGGCGGC AAGTGGACGC CGCTGGAGAG CGTCGGCGGC
AAGTAA
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| Protein sequence | MKLKQLWVAA ALCALAGGAM TAASAQEVIK LGFAAPMSGP QAQYGTDMKN GATLAIEEFN
ATHPKIAGKE VKFQLMAEDD QADPKTGTAV AQKLVDSGIK GMLGHFNSGT SIPASRVYNQ
AGIAQIAMAT APEYTKQGYK TTFRMMTSDT QQGSVVGTFA VKKLGYKNIA IVDDRTAYGQ
GLADEFEKAA KAAGATIVRR EFTNDKASDF KAILTQIKSK NPDAVFYGGA EGQSAPLLKQ
MRELGMKSTL MSGEMSKTDD FIKLAGPQAA EGMVASLAGL PLEQMPGGAG YKARYEKRFG
TPVQTYSPYA YDGAMALMKA MVAAGSSDPA KYLPILAATN TQGVTAKHYA YDDKGDLKDG
GITVYKVTGG KWTPLESVGG K
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