Gene Rpic12D_3139 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_3139 
Symbol 
ID8020823 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp3306794 
End bp3307513 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content66% 
IMG OID644831935 
Producthypothetical protein 
Protein accessionYP_002983078 
Protein GI241664718 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCAA ACACCAACGA CAGCGCCAAC GAGAGCGACG ACCCGTTCGC CGACTCCGCA 
CCCGCTGCGC CGGCGGACAA GCCCCGCCGC AAGCGCGGCA ACCAGCCGCC CGACACGCGG
CCTGAAATCT ACGTCAGCAC CGACATCGAG GCTGACGGCC CTATCCCCGG TCCGCATTCG
ATGCTGAGCT TCGCCAGCGC GGCGTACCTG GCCGACAAGA CGCTCGTCGG CACGTTCGAA
GCCAACCTGG AAACGCTGGC AGGCGCCGAG GGCCATCCTG TCCAGATGCA ATGGTGGAAA
ACGCAGCCCG AGGCGTGGGC CGCGTGCCGT GCCAATCTGG AGGCACCCGA GGTGGCCCTG
CCGCGTTACG TGGAGTGGGT CGAGAGCCTG CCCGGCAAGC CGGTGTTCGT GGCGTTTCCG
GCGGGCTTCG ATTTCACGTT CATGTTCTGG TACATGATGC GTTTTGCCGG GCGCTCGCCG
TTTGGGTGGG CCGCACTCGA CATCAAGACG CTGGCTTTTG CGCTCACGGG CATGCCGTAT
CGGCGCAACG TCAAAGCGGC CTTTCCCGAG CACTGGCACG ACCCGCTGCC GCACACGCAT
ATCGCGCTGG ATGACGCCAA AGAGCAAGGT GCGCTCTTCT GCAACATGCT CGCCGAACTG
CGCAAGCGCG AAGCCGAGCG CGCCGCCGCA CAAGTGACCC AGCAATCTGC TCAGGATTGA
 
Protein sequence
MSANTNDSAN ESDDPFADSA PAAPADKPRR KRGNQPPDTR PEIYVSTDIE ADGPIPGPHS 
MLSFASAAYL ADKTLVGTFE ANLETLAGAE GHPVQMQWWK TQPEAWAACR ANLEAPEVAL
PRYVEWVESL PGKPVFVAFP AGFDFTFMFW YMMRFAGRSP FGWAALDIKT LAFALTGMPY
RRNVKAAFPE HWHDPLPHTH IALDDAKEQG ALFCNMLAEL RKREAERAAA QVTQQSAQD