Gene Rpic12D_3084 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_3084 
Symbol 
ID8020767 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp3259519 
End bp3259962 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content63% 
IMG OID644831880 
Productheat shock protein Hsp20 
Protein accessionYP_002983024 
Protein GI241664664 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0071] Molecular chaperone (small heat shock protein) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGATC TGTTTTTTGG CACCGATCTG CTGGGCGAAT TTGATCGCCT GCAACGGCAG 
ATGGCCACTC TCTTTGCGGG TGCACCCGCC AGTCTGCGCG CCACGCGCCT GGGCACCTTT
CCACCCGTCA ACATTGGCAG CACCGATGAC TCGGTCGAGA TCGTCGCATT CGCCCCGGGG
CTCGACCCCG CGCAAATCGA CGTCTCGATC GACAAGGGGC TGCTGACGAT CAGCGGCGAG
CGCAAGCGCC CGGATTTCGA GATGACCGAC GATACGCGCG TGTACGCCGA TGAGCGTTTC
ACCGGCGCGT TCCGTCGCGT GATCGAGCTG CCACAGGATG TCGACCCCGA CAAGGTCAAT
GCACGGTACG TCAACGGCTG CCTGACCATC AGCGTCGGCA AGTCGGAGGC ATCGAAGCCG
CGTCAGATCA CCGTGCAAGG CTAA
 
Protein sequence
MSDLFFGTDL LGEFDRLQRQ MATLFAGAPA SLRATRLGTF PPVNIGSTDD SVEIVAFAPG 
LDPAQIDVSI DKGLLTISGE RKRPDFEMTD DTRVYADERF TGAFRRVIEL PQDVDPDKVN
ARYVNGCLTI SVGKSEASKP RQITVQG