Gene Rpic12D_3003 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_3003 
Symbol 
ID8020685 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp3170246 
End bp3170962 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content64% 
IMG OID644831799 
ProductGlutathione S-transferase domain protein 
Protein accessionYP_002982944 
Protein GI241664584 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.945475 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAACCA CGCTCTACTA CTGGCCCGAA ATCCAGGGCC GCGGCGAATT CGTCCGGCTG 
GCGCTGGAGC AGGCCGCCGT GCCCTATACC GACCTCGGCC GCGAAGATGA AGCCGCCATC
GCGGCGTTTC TGGACGACGC CGGCATTCCC ACACCGCCGT TCGCGCCGCC ATTCCTGTTG
GCTGGCCAGC TGGTGATCGC GCAGACGGCC AACATCCTGC TTTATCTCGG CCAGCACTAT
GGCCTGGCCC CGCACGACGA AGCCGGCGGC CTGTGGACGC ACGGCCTGCA ACTGACGATT
GCCGATTTCG TGGTCGAGAT CCATGACACG CACCACCCCA TTGCGTCGTG CGAGTACTAC
GAAGACCAGC GTACCGAAGC CAAACGCCGC ACGCAGGATT TTCTCGACAA TCGCGCGCCG
AAGTTCCTGC ACTACTTCGA GCGCGTGCTC GACCGCAACC CCGCCGGCCC AACCTGGGCC
GTGCGCGATG CGCTGACCTA TGTGGATTTG TCGCTATTCC AGATCGTGGC CGGGCTGCGC
TACGCGTTTC CTCGCCACAT GCAGCGCTAC GAGCGAGAGC TGCCGCATCT GGTTGCGCTG
CATGATCGCG TGGCGGCGCT GCCGAACATC GCGGCGTATC TGGAATCGCC GCGTCGCATT
CCGTTCAACA CGATGGGCAT CTTTCGCCAC TACCCCGAGC TTGATGCGCT GAAATGA
 
Protein sequence
METTLYYWPE IQGRGEFVRL ALEQAAVPYT DLGREDEAAI AAFLDDAGIP TPPFAPPFLL 
AGQLVIAQTA NILLYLGQHY GLAPHDEAGG LWTHGLQLTI ADFVVEIHDT HHPIASCEYY
EDQRTEAKRR TQDFLDNRAP KFLHYFERVL DRNPAGPTWA VRDALTYVDL SLFQIVAGLR
YAFPRHMQRY ERELPHLVAL HDRVAALPNI AAYLESPRRI PFNTMGIFRH YPELDALK