Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_3003 |
Symbol | |
ID | 8020685 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | + |
Start bp | 3170246 |
End bp | 3170962 |
Gene Length | 717 bp |
Protein Length | 238 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 644831799 |
Product | Glutathione S-transferase domain protein |
Protein accession | YP_002982944 |
Protein GI | 241664584 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.945475 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGAAACCA CGCTCTACTA CTGGCCCGAA ATCCAGGGCC GCGGCGAATT CGTCCGGCTG GCGCTGGAGC AGGCCGCCGT GCCCTATACC GACCTCGGCC GCGAAGATGA AGCCGCCATC GCGGCGTTTC TGGACGACGC CGGCATTCCC ACACCGCCGT TCGCGCCGCC ATTCCTGTTG GCTGGCCAGC TGGTGATCGC GCAGACGGCC AACATCCTGC TTTATCTCGG CCAGCACTAT GGCCTGGCCC CGCACGACGA AGCCGGCGGC CTGTGGACGC ACGGCCTGCA ACTGACGATT GCCGATTTCG TGGTCGAGAT CCATGACACG CACCACCCCA TTGCGTCGTG CGAGTACTAC GAAGACCAGC GTACCGAAGC CAAACGCCGC ACGCAGGATT TTCTCGACAA TCGCGCGCCG AAGTTCCTGC ACTACTTCGA GCGCGTGCTC GACCGCAACC CCGCCGGCCC AACCTGGGCC GTGCGCGATG CGCTGACCTA TGTGGATTTG TCGCTATTCC AGATCGTGGC CGGGCTGCGC TACGCGTTTC CTCGCCACAT GCAGCGCTAC GAGCGAGAGC TGCCGCATCT GGTTGCGCTG CATGATCGCG TGGCGGCGCT GCCGAACATC GCGGCGTATC TGGAATCGCC GCGTCGCATT CCGTTCAACA CGATGGGCAT CTTTCGCCAC TACCCCGAGC TTGATGCGCT GAAATGA
|
Protein sequence | METTLYYWPE IQGRGEFVRL ALEQAAVPYT DLGREDEAAI AAFLDDAGIP TPPFAPPFLL AGQLVIAQTA NILLYLGQHY GLAPHDEAGG LWTHGLQLTI ADFVVEIHDT HHPIASCEYY EDQRTEAKRR TQDFLDNRAP KFLHYFERVL DRNPAGPTWA VRDALTYVDL SLFQIVAGLR YAFPRHMQRY ERELPHLVAL HDRVAALPNI AAYLESPRRI PFNTMGIFRH YPELDALK
|
| |