Gene Rpic12D_2996 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_2996 
Symbol 
ID8020678 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp3161141 
End bp3162061 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content73% 
IMG OID644831792 
Productalpha/beta hydrolase-like protein 
Protein accessionYP_002982937 
Protein GI241664577 
COG category[R] General function prediction only 
COG ID[COG4757] Predicted alpha/beta hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.983134 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGCGCG AACCGATCGA CTACCCCGCC GATGCTCTTC CCACCCGCGA CGATCACGTC 
CGCACGGCCG ACGGCTGGAC GCTGCCCGTG ACGGTCACCA GCCCTGGGCT GGGCGCGCAC
GGCACGGTGG TGATCTGCTC GGCGCTGGGC GTGCCGCGCC AGTTCTACGC GGCGTTTGCG
CGGGCGCTGT GCCTGGCGGG CTGGCGTGTG GTGACGTTCG ACTACCGCGG CATTGGCGAG
GCGGCAGCAA CCGGCCCAGG CACGCCGCGC TTTGCCGACT GGGGCCGGCG CGACATCGAC
GCGGTGCTGA AATGGGTGCA CGACACGCTC GTCCCCGAGG GCTGCAGCGG ACGCAGGCTG
GTGGTGCTCG GCCACAGCGC GGGCGGGCAG CTGGCGGGGC TGGCGCCGCA CATCGTGCAT
ACGGATGCGC TGGTGCACGT GGCGGTGTCG CTGGCGAATG CGCGGCTCTG GCCGTGGCGC
GGGCTGCTGA CACGTCCGCA ACTCGCGTGG CTGCTGCACG TGCGGATTCC CTTGGCGGTG
GCGCGGGTGC GCGGCGGCAT GCTGCCGCTG GCGGCTGTCG GCATGGGGCC GATGGCGATT
CCGGCCGCCA TCCTGGGCGA TTGGGCGCGC TTTGCCCGGC GGCGCGGCTA CCTCTTCGCG
CGGCGTGCCG GGTTGGATAC CTCACGCTAT CCGAGGCTCG CCGTGCCGCT GCTCGCCTGG
GGTTTCGACG ATGATCCGAT GGCGCCCGCC AACGCCATCG ACGCGCTCAT CGCGCAGTTG
CCTGCCACGC GCGTCACGCG CCGCCAGGTG AGCGGCGCGG CGCTGGGTGC CAAGGGCGTC
GGCCACATGG GCTTCTTCCG CGCATCGTCC GGTGCGCCGT GGTGGCGCGA AACCGTGGCG
TGGCTCGATG CCCTCGCTTG A
 
Protein sequence
MQREPIDYPA DALPTRDDHV RTADGWTLPV TVTSPGLGAH GTVVICSALG VPRQFYAAFA 
RALCLAGWRV VTFDYRGIGE AAATGPGTPR FADWGRRDID AVLKWVHDTL VPEGCSGRRL
VVLGHSAGGQ LAGLAPHIVH TDALVHVAVS LANARLWPWR GLLTRPQLAW LLHVRIPLAV
ARVRGGMLPL AAVGMGPMAI PAAILGDWAR FARRRGYLFA RRAGLDTSRY PRLAVPLLAW
GFDDDPMAPA NAIDALIAQL PATRVTRRQV SGAALGAKGV GHMGFFRASS GAPWWRETVA
WLDALA