| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_2867 |
|---|
| Symbol | |
|---|
| ID | 8020539 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12D |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012856 |
|---|
| Strand | + |
|---|
| Start bp | 3025003 |
|---|
| End bp | 3026109 |
|---|
| Gene Length | 1107 bp |
|---|
| Protein Length | 368 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 644831654 |
|---|
| Product | extracellular solute-binding protein family 1 |
|---|
| Protein accession | YP_002982809 |
|---|
| Protein GI | 241664449 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1840] ABC-type Fe3+ transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.0576807 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTTCGTG GACGCTTTAC GCCTGCGCAC GCCGCTCTCG CTTCAATCGC AGCTGCCGCA
TTGACCCTCA GCGCCGCCGC CTTCGCGCAA GTCCCGGCCG GCTACCCCGC CAGCTATGCC
GAAACCATTG CCGCCGCCAA GAAGGAAGGC AAGGTGGTGG TGTATGCGAC GACCGACACC
AAGGCCGCCG ACCCGCTGAT CAAGGATTTC GAGTCGCTCT ACCCCGGCGT GAAGGTCGAG
TACAACGACA TGAACAGCAG CGAGTTGTAC AACCGCTTCA TCAGTGAGCA GGCTGCCGGC
GGCGCCTCGG CTGACATGAT GTGGAACTCG TCGATGGACT CGCAGCTCAA GCTGGCGCAG
ACCTACGCGA TGAAGTACGA CTCGCCGGAA GTGCCGAACG TGCCGAAGTG GGCTGTCTAC
AAGGGCCTGG CCTACGGCAC GACGTACGAG CCCGCCGTGT TCCTGTACAA CAAGCGCCTG
ATCAAGGATT CGGAAGCGCC GCAAACGCAC GCCGATTTCG CCAAGCTGGT CGCCAGCCAA
CCCGAGCGCT TCAAGAACAA GGTCACGACG TACGACATCG AGAAGTCGGC CGTGGGCTTC
ATGATGGCTG CGCAGGACAA TCTCGATTCG CCGCAGTACT TCGACTTCGT CAAGGCAGTG
GGCCCGAACC TGGTGCTGCA GTCCTCGACC GGCACGATGA TGGAGCGCGT GGCCTCGGGC
GAAAACCTGG TGGCGTACAA CATCCTGGGC TCGTACGCGA TTGCACGCGC CAAGAAGGAT
CCGTCGATCG GCATCGTCTA TCCGAAGGAC TACACGCTGG TGGTGTCGCG CGTGGCGATG
ATCGCCAAGA AGGCGAAGAA CCCGAACGCG GCCAAGCTCT GGCTGGACTA CATCCTGTCC
AAGCGCGGCC AGGAAATCCT CGCCAACAAA TCGGATCTGC ACTCGCTGCG GGACGACGTG
ACGGGCGAAG CCACCGCCGC CGGCCTGAAG AAGATTCTCG GCAACAGCAT CAAGCCGATT
CCGGTCGACG AATCGATCCT GGCGTTCCTG GAACCCAAGA AGCGCCTGGA CTTCATCAAG
CAATGGCGCA CCGCCGCCGG CCGTTGA
|
|---|
| Protein sequence | MLRGRFTPAH AALASIAAAA LTLSAAAFAQ VPAGYPASYA ETIAAAKKEG KVVVYATTDT
KAADPLIKDF ESLYPGVKVE YNDMNSSELY NRFISEQAAG GASADMMWNS SMDSQLKLAQ
TYAMKYDSPE VPNVPKWAVY KGLAYGTTYE PAVFLYNKRL IKDSEAPQTH ADFAKLVASQ
PERFKNKVTT YDIEKSAVGF MMAAQDNLDS PQYFDFVKAV GPNLVLQSST GTMMERVASG
ENLVAYNILG SYAIARAKKD PSIGIVYPKD YTLVVSRVAM IAKKAKNPNA AKLWLDYILS
KRGQEILANK SDLHSLRDDV TGEATAAGLK KILGNSIKPI PVDESILAFL EPKKRLDFIK
QWRTAAGR
|
|---|
| |