| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_2854 |
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| Symbol | |
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| ID | 8020525 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | - |
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| Start bp | 3011439 |
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| End bp | 3012494 |
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| Gene Length | 1056 bp |
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| Protein Length | 351 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 644831640 |
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| Product | integrase family protein |
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| Protein accession | YP_002982796 |
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| Protein GI | 241664436 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.820272 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGACCA TCGTCAAGAC GCCTTCCGGC ACGTGGAAGG CGGTCATCCG CAAGATCGGC
TGGCCGACCA CGGCCAAGAC TTTCCGCACC AAACGCGACG CCGAGGATTG GGCTCGGCGC
ACCGAGGACG AGATGGTCCG GGGTGTGTAT TTGTCCCGTG GGCCGTCTGA GAAGCTGACC
GTCGCCGGCG CGTTGAGGCG CTATATGGAG GAGGTTTCGG TCACGAAGAA GCCGACGACA
CAGCGCAGCG AGCGCTTCAC GGCCCAACAC TTGGAAGCCT TCTTCGGGAA GTATTCGATG
GCGGCCGTCA GCGCAGACCT GGTCGCCAAG TACCGTGATG TGCGGTTGGC GGCGGGCAAG
TCGAACAACA CGGTTCGCAT TGAACTCGCG ATGCTGGGTC ACTTGTTTCG AACGGCGATT
CAAGAGTGGA GCATCGGCTT GACGTTCAAT CCGGTTGCCA ACATTCGCAA GCCTAGTCCG
GGGACCGGCC GCGATCGTCG TCTTAGTTTG GACGAGCAGG CGCGTTTATT CGCGGCTGTG
TCAGCCCACA GCAATCCGAT GCTGGGTTGG ATCGTGGGCT TGGCTGTAGA GACCGGCATG
CGGTCATCCG AAATCGCAAC GCTACGCCGC TCACAGGTCG ATCTGAACCG TCGAGTTGTG
AACTTGCGGG ATACGAAAAA CGGCTCCGCA CGAGTGGTAC CACTTACGCG CGCCGCCGCT
GATGTGTTGC GACTGGCCCT GAGCAATCCC ATTCGTCCAT TGGACTCAGA CCTCGTGTTC
TTTGGGGAGC CAGGGCGCGA CGGGAAACGG CGGCCCTATG TGTTCCAGAA GCTGTGGACG
AGCATTGTTC GCGATATAGG CTTGGCCGAC CTTCATTTCC ACGATCTCCG TCATGAAGCC
GTAAGCCGTC TCGTTGAGGC TGGTCTCAGC GATCAGGAGG TGGCCGCCAT AAGCGGGCAC
AAGTCCATGC AGATGCTGAA GCGCTACACG CACCTACGGG CTGAGGACTT GGTGGAGAAG
CTTGACGCAG TCAATCTTGG CGGTGGTTCT GCCTAG
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| Protein sequence | MATIVKTPSG TWKAVIRKIG WPTTAKTFRT KRDAEDWARR TEDEMVRGVY LSRGPSEKLT
VAGALRRYME EVSVTKKPTT QRSERFTAQH LEAFFGKYSM AAVSADLVAK YRDVRLAAGK
SNNTVRIELA MLGHLFRTAI QEWSIGLTFN PVANIRKPSP GTGRDRRLSL DEQARLFAAV
SAHSNPMLGW IVGLAVETGM RSSEIATLRR SQVDLNRRVV NLRDTKNGSA RVVPLTRAAA
DVLRLALSNP IRPLDSDLVF FGEPGRDGKR RPYVFQKLWT SIVRDIGLAD LHFHDLRHEA
VSRLVEAGLS DQEVAAISGH KSMQMLKRYT HLRAEDLVEK LDAVNLGGGS A
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