Gene Rpic12D_2741 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_2741 
Symbol 
ID8020406 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp2895467 
End bp2897563 
Gene Length2097 bp 
Protein Length698 aa 
Translation table11 
GC content67% 
IMG OID644831522 
Productmolybdopterin oxidoreductase 
Protein accessionYP_002982684 
Protein GI241664324 
COG category[C] Energy production and conversion 
COG ID[COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0180049 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCACCC AAGTCATCCG TGCCGCCTGC CCGCACGACT GCCCCGACAC CTGCGCCTTG 
CTTGTCACCG TCGAAGATGG CCGCGCCACC CGCGTGCAGG GCGATCCGGA CCACCCGACG
ACGGCCGGCG TGCTCTGCAC CAAGGTCAAT CGGTATGCAG AACGCACGTA CCACCCCAAC
CGCCTGTTGA CGCCGATGAA GCGCGTAGGC GCCAAAGGCG AGGGCAAGTT CGAACCGATT
TCCTGGGACG AGGCCATCGA CACCATCGCC ACGCGCCTGG GCGAGATTGC GGCACGCAAC
CCGGAGGCCA TCCTCCCGTA CAGCTACGCC GGCACGATGG GCCTGGTGCA GGGGGAAAGC
ATGGCCGCGC GCTTCTTCCA CAAGCTCGGA GCGTCGCTGC TGGATCGCAC GATCTGCGCG
TCGGCCGGGG CGACGGCGCT GCGCTACACG TACGGTGCGA GCCTCGGCAT GGACATCGAG
CACGTGCAGG ACGCCAAGCT GATCCTGATC TGGGGCGCCA ATCCGATCGC GTCGAACCTG
CATTTCTGGA CGCGCGCGCA GGAAGCCAAA CGGCGCGGCG CCACGCTCGT CGCCATTGAT
CCGTATCGCT CGCTGACGGC CGAGAAGTGC CATCGCCATC TGGCGGTGCG CCCCGGTACC
GATGCGGCGC TGGCGTTGGC GATGATCCAC GTGTTGATTC GCGACGATTT GCTCGACCAC
GATTACATCG CCAATCACAC GCTCGGTTTC GAGGCGCTGC GTGAGCGCGC GCAGCAATAC
ACGCCGGAAT ACGCAGCGAC GCTGTGTGGG GTGGACGCGG CGGATATCGA GTGGCTCGCC
AAGCTGTACG GCACGACCGT CGTGCGCGAC AAGCAGCCTG CGGCCATTCG CCTGAACTAC
GGCATGCAGC GCGCGCATGG CGGCGGGCAG GGGGTGCGCG CGGTCGCGTG CCTGCCGTCG
CTGGTGGGCG CGTGGCGGGA TGCAGCGGGC GGCCTGCAAC TATCGACGTC CGGTTTCTTC
CCCATCGACA ATGCGAAGCT GCAGCGTCCT GACCTGCTGC CGAGCTGGCC GGCGCTGCCC
CGCACGATCA ACATGAGCAC CATCGGCGAT GCGCTGCTGC ATGCGGGCGA TGCGTCGTTT
GGCCCAAAGG TCGAGGCGGT GGTTGTCTAC AACAGCAACC CCGTGGCGGT GGCGCCGGAC
TCGCGCAAGG TCGCCGCCGG CTTTGCGCGC GAAGACCTCT TCACGGTGGT GCTGGAGCAC
TTCCAGACCG ACACGGCCGA CTACGCCGAC ATCCTGCTGC CGGCCACCAC GCAGCTCGAA
CATGTCGATG TGCACAAGGC TTACGGTCAC ACCTACGTGC TGGCCAACAA CGCTGCCATC
GCGCCGATGG GGCAGTCGTT GCCGAACACG GAGATCTTCC GTCGCATTGC CCGGCGCATG
GGTTTTGACG ACGCCTGCTT TGCCGACTCG GACGACGATA TCGCCAGCCA GGCCGTGCGC
CGTGATGATG CGGCCGCCGC ACACATCGAT TGGGCCACGC TCAAGCGCGA CGGCTGGCAG
AAGCTGGCGC ACCCGGCCGC GCCGCTGGCA CGTGGCGGCT ATCGCACGCC GTCAGGCCGC
TGCGAGTTCT ATTCCGAGCA GATGGCCAAC GACGGACTCG ACCCGCTGCC CGGCTATGTG
CCGCCGTACG AATCGGCAAT CAGCACGCCC GAGTTGGCCA AGCGTTATCC GCTGTCGATG
ATTTCGCCGC CGGCGCGCAA CTTCCTCAAC TCCACCTTCG TCAACGTCGA CAGCCTGCGC
AGCACCGAAG GCGAGCCGCA TCTCGATATC CATCCCGACG ACGCGAATGC ACGCGGCGTC
GTCGATGGCG AGCTTGTCCG CATCTTCAAC GATCGCGGCA CCATGCAGGC GCGCGCCCGC
GTGACCGACC GTGCGCGGCG TGGCGTGGTC GTCGGCCTGT CGATCTGGTG GAAGAAGCTC
GCGCCCGACG GCACCAACGC CAACGAGCTG ACCAGCCAGC GCCTGACCGA CATGGGCCGT
GCGCCCACCT TCTACGATTG CCTGGTCGAG GTCGCGCCGT TGGCTCCGGC CGCCTGA
 
Protein sequence
MSTQVIRAAC PHDCPDTCAL LVTVEDGRAT RVQGDPDHPT TAGVLCTKVN RYAERTYHPN 
RLLTPMKRVG AKGEGKFEPI SWDEAIDTIA TRLGEIAARN PEAILPYSYA GTMGLVQGES
MAARFFHKLG ASLLDRTICA SAGATALRYT YGASLGMDIE HVQDAKLILI WGANPIASNL
HFWTRAQEAK RRGATLVAID PYRSLTAEKC HRHLAVRPGT DAALALAMIH VLIRDDLLDH
DYIANHTLGF EALRERAQQY TPEYAATLCG VDAADIEWLA KLYGTTVVRD KQPAAIRLNY
GMQRAHGGGQ GVRAVACLPS LVGAWRDAAG GLQLSTSGFF PIDNAKLQRP DLLPSWPALP
RTINMSTIGD ALLHAGDASF GPKVEAVVVY NSNPVAVAPD SRKVAAGFAR EDLFTVVLEH
FQTDTADYAD ILLPATTQLE HVDVHKAYGH TYVLANNAAI APMGQSLPNT EIFRRIARRM
GFDDACFADS DDDIASQAVR RDDAAAAHID WATLKRDGWQ KLAHPAAPLA RGGYRTPSGR
CEFYSEQMAN DGLDPLPGYV PPYESAISTP ELAKRYPLSM ISPPARNFLN STFVNVDSLR
STEGEPHLDI HPDDANARGV VDGELVRIFN DRGTMQARAR VTDRARRGVV VGLSIWWKKL
APDGTNANEL TSQRLTDMGR APTFYDCLVE VAPLAPAA