Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_2741 |
Symbol | |
ID | 8020406 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | - |
Start bp | 2895467 |
End bp | 2897563 |
Gene Length | 2097 bp |
Protein Length | 698 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644831522 |
Product | molybdopterin oxidoreductase |
Protein accession | YP_002982684 |
Protein GI | 241664324 |
COG category | [C] Energy production and conversion |
COG ID | [COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0180049 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCCACCC AAGTCATCCG TGCCGCCTGC CCGCACGACT GCCCCGACAC CTGCGCCTTG CTTGTCACCG TCGAAGATGG CCGCGCCACC CGCGTGCAGG GCGATCCGGA CCACCCGACG ACGGCCGGCG TGCTCTGCAC CAAGGTCAAT CGGTATGCAG AACGCACGTA CCACCCCAAC CGCCTGTTGA CGCCGATGAA GCGCGTAGGC GCCAAAGGCG AGGGCAAGTT CGAACCGATT TCCTGGGACG AGGCCATCGA CACCATCGCC ACGCGCCTGG GCGAGATTGC GGCACGCAAC CCGGAGGCCA TCCTCCCGTA CAGCTACGCC GGCACGATGG GCCTGGTGCA GGGGGAAAGC ATGGCCGCGC GCTTCTTCCA CAAGCTCGGA GCGTCGCTGC TGGATCGCAC GATCTGCGCG TCGGCCGGGG CGACGGCGCT GCGCTACACG TACGGTGCGA GCCTCGGCAT GGACATCGAG CACGTGCAGG ACGCCAAGCT GATCCTGATC TGGGGCGCCA ATCCGATCGC GTCGAACCTG CATTTCTGGA CGCGCGCGCA GGAAGCCAAA CGGCGCGGCG CCACGCTCGT CGCCATTGAT CCGTATCGCT CGCTGACGGC CGAGAAGTGC CATCGCCATC TGGCGGTGCG CCCCGGTACC GATGCGGCGC TGGCGTTGGC GATGATCCAC GTGTTGATTC GCGACGATTT GCTCGACCAC GATTACATCG CCAATCACAC GCTCGGTTTC GAGGCGCTGC GTGAGCGCGC GCAGCAATAC ACGCCGGAAT ACGCAGCGAC GCTGTGTGGG GTGGACGCGG CGGATATCGA GTGGCTCGCC AAGCTGTACG GCACGACCGT CGTGCGCGAC AAGCAGCCTG CGGCCATTCG CCTGAACTAC GGCATGCAGC GCGCGCATGG CGGCGGGCAG GGGGTGCGCG CGGTCGCGTG CCTGCCGTCG CTGGTGGGCG CGTGGCGGGA TGCAGCGGGC GGCCTGCAAC TATCGACGTC CGGTTTCTTC CCCATCGACA ATGCGAAGCT GCAGCGTCCT GACCTGCTGC CGAGCTGGCC GGCGCTGCCC CGCACGATCA ACATGAGCAC CATCGGCGAT GCGCTGCTGC ATGCGGGCGA TGCGTCGTTT GGCCCAAAGG TCGAGGCGGT GGTTGTCTAC AACAGCAACC CCGTGGCGGT GGCGCCGGAC TCGCGCAAGG TCGCCGCCGG CTTTGCGCGC GAAGACCTCT TCACGGTGGT GCTGGAGCAC TTCCAGACCG ACACGGCCGA CTACGCCGAC ATCCTGCTGC CGGCCACCAC GCAGCTCGAA CATGTCGATG TGCACAAGGC TTACGGTCAC ACCTACGTGC TGGCCAACAA CGCTGCCATC GCGCCGATGG GGCAGTCGTT GCCGAACACG GAGATCTTCC GTCGCATTGC CCGGCGCATG GGTTTTGACG ACGCCTGCTT TGCCGACTCG GACGACGATA TCGCCAGCCA GGCCGTGCGC CGTGATGATG CGGCCGCCGC ACACATCGAT TGGGCCACGC TCAAGCGCGA CGGCTGGCAG AAGCTGGCGC ACCCGGCCGC GCCGCTGGCA CGTGGCGGCT ATCGCACGCC GTCAGGCCGC TGCGAGTTCT ATTCCGAGCA GATGGCCAAC GACGGACTCG ACCCGCTGCC CGGCTATGTG CCGCCGTACG AATCGGCAAT CAGCACGCCC GAGTTGGCCA AGCGTTATCC GCTGTCGATG ATTTCGCCGC CGGCGCGCAA CTTCCTCAAC TCCACCTTCG TCAACGTCGA CAGCCTGCGC AGCACCGAAG GCGAGCCGCA TCTCGATATC CATCCCGACG ACGCGAATGC ACGCGGCGTC GTCGATGGCG AGCTTGTCCG CATCTTCAAC GATCGCGGCA CCATGCAGGC GCGCGCCCGC GTGACCGACC GTGCGCGGCG TGGCGTGGTC GTCGGCCTGT CGATCTGGTG GAAGAAGCTC GCGCCCGACG GCACCAACGC CAACGAGCTG ACCAGCCAGC GCCTGACCGA CATGGGCCGT GCGCCCACCT TCTACGATTG CCTGGTCGAG GTCGCGCCGT TGGCTCCGGC CGCCTGA
|
Protein sequence | MSTQVIRAAC PHDCPDTCAL LVTVEDGRAT RVQGDPDHPT TAGVLCTKVN RYAERTYHPN RLLTPMKRVG AKGEGKFEPI SWDEAIDTIA TRLGEIAARN PEAILPYSYA GTMGLVQGES MAARFFHKLG ASLLDRTICA SAGATALRYT YGASLGMDIE HVQDAKLILI WGANPIASNL HFWTRAQEAK RRGATLVAID PYRSLTAEKC HRHLAVRPGT DAALALAMIH VLIRDDLLDH DYIANHTLGF EALRERAQQY TPEYAATLCG VDAADIEWLA KLYGTTVVRD KQPAAIRLNY GMQRAHGGGQ GVRAVACLPS LVGAWRDAAG GLQLSTSGFF PIDNAKLQRP DLLPSWPALP RTINMSTIGD ALLHAGDASF GPKVEAVVVY NSNPVAVAPD SRKVAAGFAR EDLFTVVLEH FQTDTADYAD ILLPATTQLE HVDVHKAYGH TYVLANNAAI APMGQSLPNT EIFRRIARRM GFDDACFADS DDDIASQAVR RDDAAAAHID WATLKRDGWQ KLAHPAAPLA RGGYRTPSGR CEFYSEQMAN DGLDPLPGYV PPYESAISTP ELAKRYPLSM ISPPARNFLN STFVNVDSLR STEGEPHLDI HPDDANARGV VDGELVRIFN DRGTMQARAR VTDRARRGVV VGLSIWWKKL APDGTNANEL TSQRLTDMGR APTFYDCLVE VAPLAPAA
|
| |