Gene Rpic12D_2704 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_2704 
Symbol 
ID8020369 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp2853005 
End bp2854279 
Gene Length1275 bp 
Protein Length424 aa 
Translation table11 
GC content61% 
IMG OID644831485 
Productprotein of unknown function DUF21 
Protein accessionYP_002982647 
Protein GI241664287 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG4536] Putative Mg2+ and Co2+ transporter CorB 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGACTCTT GGCCGCTCTG GGCACAAATC GGCGCCGTCG TGCTGCTGTT GTGTTGCTCC 
GCCTTCTTCT CGATTTCCGA AACCGCGATG ATGGCGCTCA ATCGCCATCG CCTGCGCCAT
CTTGCAAAGT CCAACGTATC CGGCGCGCGC AATACGCTGC AATTGCTTGG TCAGACCGAC
AAGCTGCTCT CGCTCATCCT GATCGGCAAC AACCTGATCA ATACCGCCGT GCCGGTGCTG
ATCACCACCT TGGCGATCCA CTACTTCGGC AACAACGGAA CGACGCTGTC GATCGCCACG
GCCATCGTGG CGTTTCTCAT CATCGTGTTC GCCGAGATCG CCCCGAAGAT CGTGGGCGCG
ACCTATCCCG AACGCGTTGC GTTTCCCGCC AGCTTCATCA TCAAGCCCCT GATGCAGGTT
TCGACGCCGC TGGTCGCGGT GGTCAACGCG TTTGCCATGG GGGTGCTGCG GCTGGTGCGC
ATCAATACGC GCAAGGCGCC GGAACAGCGC ATGTCGACCG AGGAACTGCG CACGCTGGTG
CTGGAATCGG GCAACTTCAT CCCGCACAAG CACCGCAGCA TCCTGCTCAA CCTGTTCGAC
CTGGACGCCA TCACCGTGGA CGACGTGATG ACGCCGCGCG CGCGGGTGGA ATCGCTCGAT
CTGTCGCGCC CGATCGAAGA GGTCATCCAG CAGCTCGAGA CCTGCTATCA CAACAAGTTG
CCGGTGTTCG AGCAGGACAG CGATCAGGTG ATCGGCATCC TGCACGTGCG CAAGGCGCTG
TCGCTGCTCG GACACACCGA CCTCACGCAC GACGATTTCC GCAGCTTGCT GGCCGAGCCC
TATTTCGTAC CGAGCGGCAC GCCCGTTTTC CGCCAACTAC AGTACTTTCA GGAGAACCGC
CGCCGCCTCG GCCTGATCGT CAATGAATAC GGCGACATGC TGGGGCTGGT GACGCTCGAA
GACATCATCG AAGAGATGAT CGGCGAGTTC ACCACCACGC TGCCCAACGC CGGCAAGCTG
GCCTGGGACA AGGAAGGCAC TTATCTGGCG GATGCGGGAA TGTCGTTGCG CGATCTGAAC
CGGCGCCTGG GCCTGAGTCT GCCGACCGAC GGCCCGAAAA CGCTCAACGG GCTGCTACTG
GAAGAGCTGG AAGAGATTCC CGAGGCGACG GTCAGCGTGA AGATCGCGGG CTGCGTGATG
GACATCGTCC AGATGGACAG TCAGTCGATC CGCACGGTGC GACTGCATCA GCCGCCGCAG
CCAAAGCGTA GTTGA
 
Protein sequence
MDSWPLWAQI GAVVLLLCCS AFFSISETAM MALNRHRLRH LAKSNVSGAR NTLQLLGQTD 
KLLSLILIGN NLINTAVPVL ITTLAIHYFG NNGTTLSIAT AIVAFLIIVF AEIAPKIVGA
TYPERVAFPA SFIIKPLMQV STPLVAVVNA FAMGVLRLVR INTRKAPEQR MSTEELRTLV
LESGNFIPHK HRSILLNLFD LDAITVDDVM TPRARVESLD LSRPIEEVIQ QLETCYHNKL
PVFEQDSDQV IGILHVRKAL SLLGHTDLTH DDFRSLLAEP YFVPSGTPVF RQLQYFQENR
RRLGLIVNEY GDMLGLVTLE DIIEEMIGEF TTTLPNAGKL AWDKEGTYLA DAGMSLRDLN
RRLGLSLPTD GPKTLNGLLL EELEEIPEAT VSVKIAGCVM DIVQMDSQSI RTVRLHQPPQ
PKRS