Gene Rpic12D_2677 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_2677 
Symbol 
ID8020342 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp2833891 
End bp2834646 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content56% 
IMG OID644831458 
Productprotein of unknown function DUF1311 
Protein accessionYP_002982620 
Protein GI241664260 
COG category[S] Function unknown 
COG ID[COG3755] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.30219 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTGGCG AACCCAATAC TATGGAGTTC GTGGATTGCA CTTCAGAAGG GCCATTTTTA 
TGCTGCTTTT ACCACTGCTG TTGTTGCGAT AGCAGTGGCT CTCACGTTTC TTGCCGGAAA
GACAATCGCA GTGGGAGACT CGGGCGAATT CCCGTACGAA GTGCGCTTCG GCTACTACGT
TTGGCTCGCC AGCATTGCGC TTGCAGGAGC CGTCGCAGCG ATTCACATTG TCCGGAGAGA
CATCAAGAAA GCAGCGGCTG TAGCCACTCG GAGCTGAGAC CTCAGAATAT GCCGATGATG
ACCAGAGCTC CCTTGTTACT GACTGCTTCG GTCCTAGCAT GCGGTGGCGT CGCTCATGCA
AGTACCGATT GCGGCAATCC TGTTACCTCG GCCGATGTCG CGGAATGTGC TGACCGAGAG
AATTTGGTAA CTGGGCAAAA GTTGGGCGCT GTCTATTCGC AAGTTCTCAT GGGCCTGAGG
AAGGTCGACA AAGAATACGG TCACTCATAC CCCAATCGCC CGCCGTTGCA CGCAGCCGAA
AGCTTCGCGG CAGCACAACG CGCATGGCTG AACTTTCGTC GCCAGTCGTG TCATGTCGAG
GAGCTTGTTG TTCGCAATAG CAACCCGAGT AGGGGCGACC AATCAGCTAT TGCAGTCGCC
GCTTGCGAGA GCAGGTTGTC GTCCGCGCGA GTGGCCGAGC TGGAGAGCTT AGTCACCACG
TATGACATTT CCGCCAGCAA GGACGACCGC CAGTAG
 
Protein sequence
MVGEPNTMEF VDCTSEGPFL CCFYHCCCCD SSGSHVSCRK DNRSGRLGRI PVRSALRLLR 
LARQHCACRS RRSDSHCPER HQESSGCSHS ELRPQNMPMM TRAPLLLTAS VLACGGVAHA
STDCGNPVTS ADVAECADRE NLVTGQKLGA VYSQVLMGLR KVDKEYGHSY PNRPPLHAAE
SFAAAQRAWL NFRRQSCHVE ELVVRNSNPS RGDQSAIAVA ACESRLSSAR VAELESLVTT
YDISASKDDR Q