| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_2650 |
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| Symbol | |
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| ID | 8020314 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | - |
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| Start bp | 2793979 |
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| End bp | 2794740 |
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| Gene Length | 762 bp |
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| Protein Length | 253 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644831430 |
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| Product | Lytic transglycosylase catalytic |
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| Protein accession | YP_002982593 |
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| Protein GI | 241664233 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.562869 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCCGCT TGTATTCAGC CCGCCTGATC GCCACTGCGC TGTGCGCGGG GACGTTGCTC
GCGGGCACGC AGGCGGCGTG GGCGGGCGCC CAGAAAGAGG AATATCTGGC GGACTCCGTG
CGCAGCGCGC TGTCTGCCGC CGTGGCCGAC AGCCGCCCGT TGCGCCCGGT ATTTGCCAGC
AACGACGAGC AACTCGGCTA CCTGCGCTGG CTGGCCGAGA TGTCTGTGCG CATGTCCGGC
AAGATTCCGC AGGCGTCGGT ACGTGTCGAA CTGATCGAGA CGGCGTATTA CGAGGCCAAG
CGCGCCGGCC TGGACCCGGC GCTGGTGCTC GGCCTCATTC AGGTGGAGAG CGGTTTCCGC
AAGTACGCCA TCAGCAGTGC CGGTGCGATG GGCCTCATGC AGGTGATGCC GTTCTGGACG
CGCAGCATCG GCGACAACGA CTCGCGCAAG CTCTTCCATC TGCAAAGCAA CCTGCGGTAT
GGCTGCACGA TCCTGCGTCA TTACCTCGAC ATGGAAGGCG GCAATCTGTA CCTGGCGCTA
GGCCGTTACA ACGGCAGCCG CGGCCAGCCC CAATATCCGA ATGCCGTGCT GGCCGCCTGG
AAGCGCTGGC AATATCAGGA GTCGAGCGCG ATGACGGTAT CGGCGCCGGT GCCTGCGGAA
TCCACTGCTC CCACGCCCCG TGCCAAAGCG CTGCCGGAAG TGCCCGCGCG CAATCCGTTC
TCGCCGCTGC GTATTGCTGG CGGGCCGGCT GGCGGTTCGT GA
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| Protein sequence | MRRLYSARLI ATALCAGTLL AGTQAAWAGA QKEEYLADSV RSALSAAVAD SRPLRPVFAS
NDEQLGYLRW LAEMSVRMSG KIPQASVRVE LIETAYYEAK RAGLDPALVL GLIQVESGFR
KYAISSAGAM GLMQVMPFWT RSIGDNDSRK LFHLQSNLRY GCTILRHYLD MEGGNLYLAL
GRYNGSRGQP QYPNAVLAAW KRWQYQESSA MTVSAPVPAE STAPTPRAKA LPEVPARNPF
SPLRIAGGPA GGS
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