Gene Rpic12D_2598 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_2598 
Symbol 
ID8020262 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp2736048 
End bp2737052 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content64% 
IMG OID644831378 
ProductMonosaccharide-transporting ATPase 
Protein accessionYP_002982541 
Protein GI241664181 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1879] ABC-type sugar transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.780963 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACGCA AACTTCGCCG GCTGACCCTG TCCGCCCTGG CAGCCACCCT GTGCCTGGCG 
CCGCTGGCCG CCAGCCTGCC CGCCCACGCC GACGAGCCGC TCAAGATCGG CTTCCTGGTC
AAGATGCCCG AGCAGGCGTG GTTCATCAAC GAGCAGAAAG CCGCCACCGA GCTTGGTCAG
AAGAACGGCT TTTCGGTGGT GAACATCGGC ACGCCCGACG GTGAAAAGGT GCTGTCCGCC
ATCGACAACC TGGGCGCGCA GGGTGCCAAG GGCTTCGTTA TCTGCGCACC CGACGTGCGC
CTGGGCCCGG CCATCTCGGC ACGCGCCAAG CACTACAACA TGAAGTTCGT CACGGTCGAC
GATCAGCTCG TCGACTCGTC CGGCAAGCCG CTGGCCAACG TGCCGCACCT GGGCATGTCG
GCCTTCAAGA TCGGCAACCA AGTCGGCCAG GCGATTTCCG ACGAGATGAA GCGCCGCGGC
TGGAAGCCCG AGGAAGTGGG CGCGCTGCGC ATCACCAACT ATGAGTTGCC GACCGCCAAG
CTGCGTACCG ACGGCGCGAC GCAGACACTG CTGGCCGGCG GCTTCAAGAA AGAAAACATC
TTCGACGCGC CGCAAAAGAC CACCGACGAC GCAGGTGGCT TCAATGCCGC GTCGCCGGTG
CTGGCACAGC ATGCAGGCAT CAAGAAGTGG GTGATCTTCG CGCTCAATGA AGAGAGCGTG
CTGGGCGGCG TGCGCGCCAC CGAGCAGCTG CACATTCCGG CAGCCGATGT GATCGGCGTC
GGCATCAACG GTGCCGGCGA GGCGTTTGCC GAATTCCAGA AGAAGGAGCA GACCGGCTTC
TTCGGCACGA TTGCCGTCAG CTCGACCAAC CACGGCAAGG AGAGCGCTGC AAACCTCGTC
GATTGGATCA AGACCGGCAA GCAGCCGCCG GCCGATACGC AAACCACCGG CAAGCTGATG
GTGCGCGGCA ATTGGCAAGA GGTGCGCAAG GAACTGGGCA TTTGA
 
Protein sequence
MQRKLRRLTL SALAATLCLA PLAASLPAHA DEPLKIGFLV KMPEQAWFIN EQKAATELGQ 
KNGFSVVNIG TPDGEKVLSA IDNLGAQGAK GFVICAPDVR LGPAISARAK HYNMKFVTVD
DQLVDSSGKP LANVPHLGMS AFKIGNQVGQ AISDEMKRRG WKPEEVGALR ITNYELPTAK
LRTDGATQTL LAGGFKKENI FDAPQKTTDD AGGFNAASPV LAQHAGIKKW VIFALNEESV
LGGVRATEQL HIPAADVIGV GINGAGEAFA EFQKKEQTGF FGTIAVSSTN HGKESAANLV
DWIKTGKQPP ADTQTTGKLM VRGNWQEVRK ELGI