Gene Rpic12D_2516 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_2516 
Symbol 
ID8020180 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp2641748 
End bp2642506 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content57% 
IMG OID644831297 
ProductGp37Gp68 family protein 
Protein accessionYP_002982460 
Protein GI241664100 
COG category[S] Function unknown 
COG ID[COG4422] Bacteriophage protein gp37 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.237707 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.484258 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAACCA TCAGCAAGAT TGAGTGGACT GAGCAAACGT GGAACCCGAC AGTCGGGTGC 
ACCAAGATCT CGCCCGGGTG CAAGCATTGC TATGCGGAGG CCATGGCCAA GCGGCTGAAA
GCTATGGGGA CGCCTGGCTA TGAGAACGGC TTTGCGCTCA CTCTTTTGCC TGAGCGCTTC
AACGACCCGA TCAAACGCAA GAAGCCGACA GTCTATTTTG TGAACTCCAT GTCGGATCTG
TTCCACGAGC GGGTGCCGGA CGCGTATATC GACAAAGTGT TCGAAGTCAT CGCGCAAACA
CCGCACCATA CATACCAAAT TCTTACCAAA CGAGCCGCTC GGATGGCGCG TTATTTCCGG
AAGCGCTCCG TGCCGACGAA TGCGTGGCTT GGGGTCTCTG TCGAGGACCG GAAATACGGC
GTTCCACGTA TCGACCATCT ACGTCAAGTG CCCGCGACCA TCCGGTTCCT ATCGGTTGAG
CCGCTACTGG CTGATGTTGG CGAACTCGAT CTGACAGACA TTCATTGGGT GATCGTGGGC
GGTGAGTCTG GTCCGAAGGC ACGCCCAATG AAGATGGAAT GGGCAGAGGC TGTTCGGGAG
CAATGCCAAG AGCAGGGCGT CGCCTTTTTC TTTAAGCAGT GGGGCGGTTG GGGTGCAGAC
GGCAAAAAGC GGGCGAAGGC TGCCAACGGT CGCGAATTAA ATGGCAGGAC CTGGGACGAA
ATGCCGGTCA CTGTCGTAGA GCGCGTGGCT TCTAACTGA
 
Protein sequence
MTTISKIEWT EQTWNPTVGC TKISPGCKHC YAEAMAKRLK AMGTPGYENG FALTLLPERF 
NDPIKRKKPT VYFVNSMSDL FHERVPDAYI DKVFEVIAQT PHHTYQILTK RAARMARYFR
KRSVPTNAWL GVSVEDRKYG VPRIDHLRQV PATIRFLSVE PLLADVGELD LTDIHWVIVG
GESGPKARPM KMEWAEAVRE QCQEQGVAFF FKQWGGWGAD GKKRAKAANG RELNGRTWDE
MPVTVVERVA SN