Gene Rpic12D_2515 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_2515 
Symbol 
ID8020179 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp2640406 
End bp2641668 
Gene Length1263 bp 
Protein Length420 aa 
Translation table11 
GC content56% 
IMG OID644831296 
Producthypothetical protein 
Protein accessionYP_002982459 
Protein GI241664099 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.17861 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.531019 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCACACT ACACCTGGGT CTGGGGAAGT CCGCCACCGC TGCTTAAGCG GCATAGCGAG 
GTCAAGCATG CGCTCCTGCG CAACTACTTG GTCGACTATT TCCTGACGCT GGTGTCGCTG
CCGCAACAAG ACAAGATCCA GCTGACCATC GTTGATGGCT TCTGTGGTGG TGGGCTCTAT
CTCAATGAGG ATGGCCAGGA AGTTCCGGGC TCGCCCCTCG TCATTCTTGA GGCTATACGC
GAGGCCGAGA TCCTCGTGAA TGTTCGGCAG GAACGTCGCA AGCCCATCCT GATTGACGTC
GAACTCATCT GCATTGACGC TAGTGAGCAG TCGCTGGACT ATCTTGAGCG GTTGCTCAGG
GAGCGAGGGT ACGGAGCAGC GCTCGCCATC GGGAAAGTAA GCATAGTCAA AGGCGAGTTC
GCCGACCATT GTGGTGCAGC TATTCAGCGA TGCCATGATC GAAGTCCTCG TTCTGGACGA
GCGCTGTTCG TTCTCGATCA GTATGGCTAT TCCGACGTGC CGATGCACTG TTTGCGCGAT
ATTTTTGCCA AACTCAAGCA TGCCGAGGTG ATCCTCACCT TCTACATCGA TGCGCTGATC
AAGTACCTGA ATGAGCGCAA CCTTGCGGCC TTCGAGAAGG CCACAGGCAT CAGCGCATCA
GTGCGGGCAT CCGAGATCGA CGAGATCAAG CAGTCGCCAC GCTGGCGTGT GCATCTCCAG
TCCTCGCTCT ATCGGGATCT AACAGATCAA TGCTCGGCCC AGTTTTACAC GCCGTTCTTT
GTTCGCCCTG AGCGCGGGCA TGGTGATTTT TGGCTATTGC ACCTGTCTCA GCATTGGAAA
GCTCGGGATG TTATGGCTTC CACGCATTGG CAGCACCACA ATCACTTCGC TCACTACGGG
GACGCTGGCT TCCATATGTT TAGCACGGGC TACATCAGCA AGATCGACGA TGAGCACAAG
CTGCAGGCGG GATTCGACTT CAGCGAGGTC GCGGCAGCAG TGAGCAAGGA AACCATGCTT
GAACAGGTCC CCGCGATGTT GTTCGATGGC GCAGAGGGAA TGACCTTCGA GCAGTTCTTT
CTGAAGCTGA TCAACACAAC GCCTGCCACT CGCGAAATGG TGGAGGCCAC CCTGCTAGAG
CTTCACCAAG GCGGTGAGAT CGTCGTGGTC GATGAATCCG GTGACCCCTC CAGGGCGCGC
GTCAGCCTGA AGAGCAATCA TGTTCTGCGC TTGCCGTCGC AGCGCTCCTT CTTGTTTTCT
TGA
 
Protein sequence
MPHYTWVWGS PPPLLKRHSE VKHALLRNYL VDYFLTLVSL PQQDKIQLTI VDGFCGGGLY 
LNEDGQEVPG SPLVILEAIR EAEILVNVRQ ERRKPILIDV ELICIDASEQ SLDYLERLLR
ERGYGAALAI GKVSIVKGEF ADHCGAAIQR CHDRSPRSGR ALFVLDQYGY SDVPMHCLRD
IFAKLKHAEV ILTFYIDALI KYLNERNLAA FEKATGISAS VRASEIDEIK QSPRWRVHLQ
SSLYRDLTDQ CSAQFYTPFF VRPERGHGDF WLLHLSQHWK ARDVMASTHW QHHNHFAHYG
DAGFHMFSTG YISKIDDEHK LQAGFDFSEV AAAVSKETML EQVPAMLFDG AEGMTFEQFF
LKLINTTPAT REMVEATLLE LHQGGEIVVV DESGDPSRAR VSLKSNHVLR LPSQRSFLFS