Gene Rpic12D_2472 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_2472 
Symbol 
ID8020136 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp2587957 
End bp2589192 
Gene Length1236 bp 
Protein Length411 aa 
Translation table11 
GC content69% 
IMG OID644831253 
Productimidazolonepropionase 
Protein accessionYP_002982416 
Protein GI241664056 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1228] Imidazolonepropionase and related amidohydrolases 
TIGRFAM ID[TIGR01224] imidazolonepropionase 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGATC CGGCCAACCC GCACTGGGAT GCGCTCTGGA CCAACGTCCA CCTCGCTACG 
CTCACCGCCG ACGCTGACGG CTACGGCGAT ATCCGCGACG GTGCCATCGC CGTAAAGAAC
GGCCGCATTG CGTGGCTTGG CTACCGGGCC GATCTGCCCG TCAACGCCCG TGCCACGCTG
GAGCACGACG GCGGCGGCGC GTTGCTCACG CCGGGCCTGA TCGATTGCCA CACACACCTC
GTCTACGCCG GCAACCGCAG CAATGAATTC GAAGCGCGCC TGAACGGCGT GCCATACGAA
GAGATCGCGC GCGCGGGCGG CGGCATCCTC TCGACCGTTC GCGCCACGCG GGCGGCCAGC
GAAGACGCGT TGGCCGAAGC CAGCCTGCCT CGCCTGAATG CGCTGCGCGC CGAAGGTGTC
ACCACAGTCG AAATCAAGTC CGGCTACGGC CTGAACCTCG AAACCGAGCG CCGCATGCTG
CGTGTGGCGC GCCGCTTCGG CCAGGCATTG CCAGTGCGCG TGCGGACCAC GTTCCTCGGC
GCGCATGCCG TACCGCCTGA ATTCGCCGGC CGCGCGGATG ACTACATCGA TCATCTCTGC
GCCGATGTGC TGCCCGCGCT TGCCGCAGAA GGTCTCGTCG ATGCGGTTGA TGCCTTCTGC
GAAACCATTG GTTTCACGCC CGCTCAGACG GCGCGCATGT TCGAGGCGGC GCAGCGCCAC
GGCCTGCCGG TCAAGCTGCA CGCCGAACAG CTCTCCGACC AGGGTGGCGC GGCGCTGGTG
GCTCGCTACG GCGGTCTTTC AGCGGATCAT CTCGAATGCC TGACCGATGC AGGCGTAGCC
GCCATGGCGC AAGCCGGCAC GGTCGCCGTG CTGCTGCCCG GCGCGTTCTA CTGCCTGCGC
GAAACGCGCC TGCCGCCGAT GGCCGCCCTG CGCGCCGCCG GTGTGCCCAT GGCCGTGTCG
ACGGACTGCA ACCCCGGCAC ATCGCCGATG TCGTCGCTGC TGCTGGCGAT GAACATGGCA
TGCACGCTGT TCCGCCTGAC GCCGCTGGAA GCGCTGACCG GCGCCACGCG TCATGCTGCC
GCAGCGCTGG GCCTGTCCGG CACGTGTGGC GTGCTGGCCC CGGGCTGCGC GGCCGATTTC
GCTCTGTGGC GCATCGACCG GCCCGCCGAT CTGGCGTACG CGATGGGGCT TAACCCGTGT
GTGGGTGTGG TCAAGGACGG CGCCGTGGCG GCGTAA
 
Protein sequence
MTDPANPHWD ALWTNVHLAT LTADADGYGD IRDGAIAVKN GRIAWLGYRA DLPVNARATL 
EHDGGGALLT PGLIDCHTHL VYAGNRSNEF EARLNGVPYE EIARAGGGIL STVRATRAAS
EDALAEASLP RLNALRAEGV TTVEIKSGYG LNLETERRML RVARRFGQAL PVRVRTTFLG
AHAVPPEFAG RADDYIDHLC ADVLPALAAE GLVDAVDAFC ETIGFTPAQT ARMFEAAQRH
GLPVKLHAEQ LSDQGGAALV ARYGGLSADH LECLTDAGVA AMAQAGTVAV LLPGAFYCLR
ETRLPPMAAL RAAGVPMAVS TDCNPGTSPM SSLLLAMNMA CTLFRLTPLE ALTGATRHAA
AALGLSGTCG VLAPGCAADF ALWRIDRPAD LAYAMGLNPC VGVVKDGAVA A