Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_2461 |
Symbol | |
ID | 8020125 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | + |
Start bp | 2576581 |
End bp | 2577279 |
Gene Length | 699 bp |
Protein Length | 232 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644831242 |
Product | ABC transporter related |
Protein accession | YP_002982405 |
Protein GI | 241664045 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1122] ABC-type cobalt transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.405076 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.816546 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGCGT CGTCGCAGCC CACGATGGTG TTTGAAGGCT TGCGCTGCCA GCACGGCGCG CGCGTTCTGT TCGAGATTCC GCGTCTGGCG CTGTCGGCAG GGCACGCGAT CGTCATTACC GGCGCAAACG GTGTCGGCAA GACAACGTTG CTGCGCATGC TGGCCGGGCT CGCACCCGCC CATGGTGCGA CCGTCGATTT GGGCCGCGGG CAGCAGGCGC TATCGCCCTA CCCGGCCGAG CTGCGCGCGC GGCTGACTTA CGTGCACCAG CATCCCTACC TGTTCCGCAC TTCGGTACGC GCGAATCTTG CTTATGGGCT CATCACGGGC GCGCATCGCG TGGCACGTGC AGAGTTGAAT GCCCGCGTCC ACGATGCGCT GCGCTGGGCA GGCCTGCAAC ATGTGGTGGA TGTGCCGCCC GAGCGCCTGT CCGGCGGCGA AACGCAACGT CTTGCCTTGG CGCGGGCGCG CGCTCTGCAC ACGGATGTGC TGCTGCTCGA CGAACCGACG TCGAACCTGG ACGGCGCTGC GCGCGAGCAA GTCATTGCAC TTGTGGGAGA ACTGGCAGCA GAGGGCCGCA CGCTGCTGAT GGTCTGCCAC GACCGCGAAC TCATCAACCT GCCCGGCGTG GCGCGCTGGA AGCTAGAGCA CGTCGACGGA CAGGGCCGGC TCGAAATGCG CGGGCACCAC GCCGCGTAG
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Protein sequence | MSASSQPTMV FEGLRCQHGA RVLFEIPRLA LSAGHAIVIT GANGVGKTTL LRMLAGLAPA HGATVDLGRG QQALSPYPAE LRARLTYVHQ HPYLFRTSVR ANLAYGLITG AHRVARAELN ARVHDALRWA GLQHVVDVPP ERLSGGETQR LALARARALH TDVLLLDEPT SNLDGAAREQ VIALVGELAA EGRTLLMVCH DRELINLPGV ARWKLEHVDG QGRLEMRGHH AA
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