Gene Rpic12D_2461 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_2461 
Symbol 
ID8020125 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp2576581 
End bp2577279 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content67% 
IMG OID644831242 
ProductABC transporter related 
Protein accessionYP_002982405 
Protein GI241664045 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1122] ABC-type cobalt transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.405076 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.816546 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCGT CGTCGCAGCC CACGATGGTG TTTGAAGGCT TGCGCTGCCA GCACGGCGCG 
CGCGTTCTGT TCGAGATTCC GCGTCTGGCG CTGTCGGCAG GGCACGCGAT CGTCATTACC
GGCGCAAACG GTGTCGGCAA GACAACGTTG CTGCGCATGC TGGCCGGGCT CGCACCCGCC
CATGGTGCGA CCGTCGATTT GGGCCGCGGG CAGCAGGCGC TATCGCCCTA CCCGGCCGAG
CTGCGCGCGC GGCTGACTTA CGTGCACCAG CATCCCTACC TGTTCCGCAC TTCGGTACGC
GCGAATCTTG CTTATGGGCT CATCACGGGC GCGCATCGCG TGGCACGTGC AGAGTTGAAT
GCCCGCGTCC ACGATGCGCT GCGCTGGGCA GGCCTGCAAC ATGTGGTGGA TGTGCCGCCC
GAGCGCCTGT CCGGCGGCGA AACGCAACGT CTTGCCTTGG CGCGGGCGCG CGCTCTGCAC
ACGGATGTGC TGCTGCTCGA CGAACCGACG TCGAACCTGG ACGGCGCTGC GCGCGAGCAA
GTCATTGCAC TTGTGGGAGA ACTGGCAGCA GAGGGCCGCA CGCTGCTGAT GGTCTGCCAC
GACCGCGAAC TCATCAACCT GCCCGGCGTG GCGCGCTGGA AGCTAGAGCA CGTCGACGGA
CAGGGCCGGC TCGAAATGCG CGGGCACCAC GCCGCGTAG
 
Protein sequence
MSASSQPTMV FEGLRCQHGA RVLFEIPRLA LSAGHAIVIT GANGVGKTTL LRMLAGLAPA 
HGATVDLGRG QQALSPYPAE LRARLTYVHQ HPYLFRTSVR ANLAYGLITG AHRVARAELN
ARVHDALRWA GLQHVVDVPP ERLSGGETQR LALARARALH TDVLLLDEPT SNLDGAAREQ
VIALVGELAA EGRTLLMVCH DRELINLPGV ARWKLEHVDG QGRLEMRGHH AA