| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_2435 |
|---|
| Symbol | |
|---|
| ID | 8020099 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12D |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012856 |
|---|
| Strand | + |
|---|
| Start bp | 2554734 |
|---|
| End bp | 2555384 |
|---|
| Gene Length | 651 bp |
|---|
| Protein Length | 216 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 644831216 |
|---|
| Product | DNA-3-methyladenine glycosylase II |
|---|
| Protein accession | YP_002982379 |
|---|
| Protein GI | 241664019 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0122] 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGTCG CCGCAGACCT ATCCGAAAGC GCCTACCGGC AAGCCGCAGC CTTCCTGGCC
ACGCTGGACG AAGACTGGGC ACACCACATT TCCGCCACCG GCCCCTGCCG CCACACCGCC
AAGCCAGCGC GCGAACCTTA TGAAGCACTG ATCCGCGCGA TCGCCTATCA GCAACTGCAC
GCCAAAGCCG GTGACGCCAT CCTCGGACGT TTTCTTGCGC TGTATCCGGC CGCCGCGTTT
CCCGCACCGC AACAGGTGCT TGCCACCGAC GAGGCAGCGC TGCGCGCCTG CGGTTTCTCT
GCGACCAAAC TGGCGACCAT TCGCGGCATC GCCCAAGCCG CGCTCGACGG CATCGTGCCC
ACGCGCGAGC AGGCGCTCGC CATGCCGGAT GAAGCCCTCA TCGAGCGGCT GGTGACACTG
CGCGGGGTTG GCCGGTGGAC GGTCGAAATG CTGCTGATCT ACACGCTGGA GCGCTCGGAC
ATCTTGCCCG CAGACGACTT CGGCGTGCGC GATGGCTACC GACGTTTGAA GCAGCTCGAT
GCCACGCCCA CACGCAAGCA GATGGAGACG ATTAGTCTTG CGTGGAGCCC GTATCGAACC
GTCGCGGCCT GGTACTTATG GCGCGTGCCC GTCAATGTTT CAGGCTCGTG A
|
|---|
| Protein sequence | MTVAADLSES AYRQAAAFLA TLDEDWAHHI SATGPCRHTA KPAREPYEAL IRAIAYQQLH
AKAGDAILGR FLALYPAAAF PAPQQVLATD EAALRACGFS ATKLATIRGI AQAALDGIVP
TREQALAMPD EALIERLVTL RGVGRWTVEM LLIYTLERSD ILPADDFGVR DGYRRLKQLD
ATPTRKQMET ISLAWSPYRT VAAWYLWRVP VNVSGS
|
|---|
| |