| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_2434 |
|---|
| Symbol | |
|---|
| ID | 8020098 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12D |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012856 |
|---|
| Strand | + |
|---|
| Start bp | 2554062 |
|---|
| End bp | 2554718 |
|---|
| Gene Length | 657 bp |
|---|
| Protein Length | 218 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 644831215 |
|---|
| Product | 2OG-Fe(II) oxygenase |
|---|
| Protein accession | YP_002982378 |
|---|
| Protein GI | 241664018 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG3145] Alkylated DNA repair protein |
|---|
| TIGRFAM ID | [TIGR00568] DNA alkylation damage repair protein AlkB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCACCG GCGATCTGTT TGCCGATCAC TCACCCGCTG ACGACGCGCG CATTGCGCTC
GGCGAGGCGG CGTTTGTCTT GCGCGGCTTT GCGCTGTCGG AAGCGCCGGG CCTGATCGCG
GCGGTGGACG CCATCGCGCA GCAGGCCGCG TTTCGGCACA TGGTCACGCC GGGTGGCTTC
GAGATGTCAG TCGCGCTCAC CAACAGCGGC GCGCTGGGCT GGACATCAGA CCGCCGCGGC
TACCGCTATG CCACGCACGA CCCGCTCACA GGAAACCCCT GGCCGCCGCT GCCCGATGTG
TTCCTGCGTC TCGCGCACAA CGCGGCCGCC GAAGCAGGCT TCCACGGCTT CACGCCAGAC
GCCTGCCTCA TCAACCGCTA TGTACCCGGC GCCCGCATGT CGCTGCATCA GGACAAAGAC
GAGCAGGACT ACGGCGCGCC GATCGTCTCA GTGTCACTCG GCATGCCGGC GGTCTTTCTG
TTTGGCGGAC ATCGCCGCGC CGACAGACCG CAACGCATTC CTCTTTTTCA CGGTGATGTC
GTCGTTTGGG GTGGCCCGGA TCGCCTGCGC TATCACGGGA TTGCACCGCT CAAGGACCAC
CCACACGCAA TGCTGGGCAG CCAGCGCATC AACCTCACGT TCCGCAAGGC CGGCTGA
|
|---|
| Protein sequence | MTTGDLFADH SPADDARIAL GEAAFVLRGF ALSEAPGLIA AVDAIAQQAA FRHMVTPGGF
EMSVALTNSG ALGWTSDRRG YRYATHDPLT GNPWPPLPDV FLRLAHNAAA EAGFHGFTPD
ACLINRYVPG ARMSLHQDKD EQDYGAPIVS VSLGMPAVFL FGGHRRADRP QRIPLFHGDV
VVWGGPDRLR YHGIAPLKDH PHAMLGSQRI NLTFRKAG
|
|---|
| |