| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_2359 |
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| Symbol | |
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| ID | 8020023 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | + |
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| Start bp | 2481196 |
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| End bp | 2482764 |
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| Gene Length | 1569 bp |
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| Protein Length | 522 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644831141 |
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| Product | major facilitator superfamily MFS_1 |
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| Protein accession | YP_002982304 |
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| Protein GI | 241663944 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.410031 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.197177 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCGGGC ACATGTCGCT GCAAATCCTC AAACCCGCGT CGCTGCGGGC ATTTCCCCAC
TTTTCTTCGG CGCGCGTCCA CGCTTTTGGG CTGGCGATGG GCCTGTCCAC GGGACTCGAT
TTTGTCTCGT CGCAGATGTT CGCCGTGGCG GGCCAGCACA TCCAGGGCGG TGTGCATGCG
AGCCCAGAGG CGTATCTGTA CGCCGTCACA GCGTATGCCG TGGCGGCCGT GGTCGCCAAC
CTCGCCATCG GCCGCATTGC CGCGCACGTG GGCTACCGGA TGTATTCGCT GGTGGGCATC
GTGCTGTTCG CCATCGGCTG CGTGGTGTGC GCCGAGTCCA ACAACATCGG CGAGCTCGTC
ATCGGACGGA CGATCCAGGG CCTGGGAGCG GGCGGCCTGT TTTCGGCGTC GCGCATTCTG
GTGCAACTCA CGGCCGAGCC CGACGAGCGC ATTCCGCCGA TGCTGATGTT CAGTGTCGGC
CTGTTCGGGC TGACCACGAT TGCACCGTGG ATCTGCGCCG AGGTGCTGGA ATACAGCGAG
TGGCGCGTAA TCTTCTGGAT CGAACTGGCG CTCGCAGGCG CGGCATGGAT GGCGGTGTTC
TTCCTGCCAC CCGAACACCA TCAACCGCGC ACACGCGCTG CACGCCGCCC CGATGCGGCG
CCGCCACAAC AAAGCCAATG GGATTGGATT GGCGTGGGCG CCATGGCCAT CGGCGCGCTG
TCGTTCCTGA TGGGCCTGTC GGAGCTGCGT TACAGCCGTC TGACGGCCTC GCCTGTCATT
CCGCTGTTGT TGCTGGGCGG TGCGGCTTCG TTGCTGCTGG CCATCCACCG TCTGCGCACG
CACCCCGACC CTTGGCTGGA TCTTTCCCGC CTGAACGGCC GCCGCTATCT GTGGGGCATC
GGCTTTTACG GCGTCTATTA CCTGATGAGC GGGTACTGGT CGTACCTGTT TCCGGCGGTG
TCGCAAGGCG GCTTGGGTTT TACTTTTCGC ACGACCACGC TGTTCCTGAT GATCAGCGGG
GCGGTGTCGA CGGTGGTGGC GGTCGTCATG ACGGTCTGGT TGCCGTTCTT CTTCCGCAAG
CGCCGCTTCA TTGCCATCGG CTTTGCGGTG TATGCGGCAG CCGCGCTGCT GCTGGCGACA
AGCCTGATGC CGGGCGCGCC GGACTATGCG TTCTTCCCCG TGTCGGCCCT GGAAGGCGTC
ACGCCGGGCG CGGTGATGAT CCAGGTCGCG ATGATGACCT ACCTCGATCT CGACCGCGAA
GACTTTGCGC ACGGCTACCA GATGAAGAAC ATAGCGCGCC AGTTCGCGAC CGCGGTAGGC
ACGGGGCTGG CGGCGGTGTC GCTGCAGACG CAGCAGGCGG AATCGCGCTC ACTCATCGTG
GCGCACGTCA CACGGTTCAC CTCAGACCTG CAAGCTGCCA ACCCGCTCAC GCCCGAGCGG
TTGGCAAGCC TCTCTGCCGA AATTGATCGG CAAGCGACGT TGTTGGCAGG CACGCAACTC
TTCAGTTGGT TTGCCGTGGC ATGCAGTGTG TTTGCCGTAC TCGTGTTGGT GCAGCGCTCG
CTGCGCTGA
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| Protein sequence | MLGHMSLQIL KPASLRAFPH FSSARVHAFG LAMGLSTGLD FVSSQMFAVA GQHIQGGVHA
SPEAYLYAVT AYAVAAVVAN LAIGRIAAHV GYRMYSLVGI VLFAIGCVVC AESNNIGELV
IGRTIQGLGA GGLFSASRIL VQLTAEPDER IPPMLMFSVG LFGLTTIAPW ICAEVLEYSE
WRVIFWIELA LAGAAWMAVF FLPPEHHQPR TRAARRPDAA PPQQSQWDWI GVGAMAIGAL
SFLMGLSELR YSRLTASPVI PLLLLGGAAS LLLAIHRLRT HPDPWLDLSR LNGRRYLWGI
GFYGVYYLMS GYWSYLFPAV SQGGLGFTFR TTTLFLMISG AVSTVVAVVM TVWLPFFFRK
RRFIAIGFAV YAAAALLLAT SLMPGAPDYA FFPVSALEGV TPGAVMIQVA MMTYLDLDRE
DFAHGYQMKN IARQFATAVG TGLAAVSLQT QQAESRSLIV AHVTRFTSDL QAANPLTPER
LASLSAEIDR QATLLAGTQL FSWFAVACSV FAVLVLVQRS LR
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