Gene Rpic12D_2352 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_2352 
Symbol 
ID8020016 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp2474312 
End bp2475811 
Gene Length1500 bp 
Protein Length499 aa 
Translation table11 
GC content68% 
IMG OID644831134 
Productmetallophosphoesterase 
Protein accessionYP_002982297 
Protein GI241663937 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.978638 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.379093 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCGCTC CGGTGCGACG AAAACGCACC GTGTTCACGA TGCTCTCTCT TGCCGCGCTG 
GCCGCTGCCG CTGTAATTGC AGGCTGCGGT GGCTCGTCGT CCGATTCGAC GCCGGTGTCG
ACGGCCACGC CTTCGGATGC GGCCACGGCT GACGCCAACA TCCAGGCCGC ATGGGTGGAA
ATCGGCGACA GCAACCAGGC TGTCGTGCGC GCCGTCACGA GCTATACGAA CAGCGCCTCG
CCCGTCGACA GCTCGGTCTG CCCGCTGCTG ACGGTGGACG GCACCTCCAC GCGCATGACG
CTGCGTGTGG CGGCCGGCAC GCCGGCGCAA CGCACCACGG CCAGCGCCGC CAGCGATTCG
AAAGCCTCGT CGTTCCCTGT GAATGCCTGC GAAGCCACCG TGGCCTCCAC GGCCAAGGCC
GCGTCGATCG GCGCGCGCGT GCTGCCGCTG CCCAAGGCCA ACCCGCAGCG CGTGGTGATC
CTGGCGGACA CCGGCTGCCG CATGAAGAAG TCGAGCAACA CGTTCCAGTC GTGTAACGAC
CCGCTGTCGT GGCCGTTTGC GAGCGCTGCC GCCACGGCCG CCAAGATGAA CCCGGACCTC
GTCCTGCACG TGGGCGACTA CCACTACCGC GAAAACGCCT GCCCGCCTGA CGTGGCCGGC
TGCCAGGGCA GCCCCTGGGG ATACGGCTGG GATACGTGGC AGGCCGACCT GTTCCAGCCC
GCCGCTCCGC TGATGGCTGC GGCCCCGTGG GTGCTGGTCC GCGGCAACCA CGAGGAATGC
GCACGCGCCG GCCAAGGCTG GTACCGCTTC CTGGATCCAC GCCCGTACTC CACCGCCCGC
TCGTGCGACG ACCCGGCCAA CGACACCGCT GCCAACGCGT CGGACCCGTA CGCCGTCGCC
ATCGGCAGCG ACACGCAGGT CATCGTGTTC GATTCGGCTA AGGCCGGCAC AACGGCATTG
GCGACGACCG ACCCGTGGTT CCAGACCTAC CAGAAGCAGT TCAGCACGGT GGGCACGCTG
GCCGCCAAGC CGGGCGTGAT GTCGATCTTC ACGAACCACC ACCCGATCCT GGGCTTCGTG
CCCATCGCGG GCAGCACGCC GCTGGGCGGC AATGCGGCGC TGCTGTCGGT CATGAACAGC
CTGAACGCCA CGGCGTATTA CCCGCCCGGC GTGCAGGTCG CGCTGCACGG CCACGTGCAT
GACTTCCAGG CCATCAACTT CACCAGCAAC CATCCGGCGA CCATCGTTGC CGGCAACGCC
GGCGATTCGC TCGACGTGGC CCTGCCCGAT CCGTTCCCGG CTATCAGCCC GGCTTCGGGT
GTGACCGTTG GCAGCATCTC GCACAACAAC TCGTTCGGCT TCATGGTGAT GGACCGCCAG
CCCGCGCCCG CCAAGGGCTG GTTGTTCAAG GCCTACACCG TAGCCGGCAA GCTGCTGACA
ACGTGCACGC AGAACGGCAC GAGCCTGGTG TGCGACAAGA CAGGCTTCGT CGCACCTTGA
 
Protein sequence
MFAPVRRKRT VFTMLSLAAL AAAAVIAGCG GSSSDSTPVS TATPSDAATA DANIQAAWVE 
IGDSNQAVVR AVTSYTNSAS PVDSSVCPLL TVDGTSTRMT LRVAAGTPAQ RTTASAASDS
KASSFPVNAC EATVASTAKA ASIGARVLPL PKANPQRVVI LADTGCRMKK SSNTFQSCND
PLSWPFASAA ATAAKMNPDL VLHVGDYHYR ENACPPDVAG CQGSPWGYGW DTWQADLFQP
AAPLMAAAPW VLVRGNHEEC ARAGQGWYRF LDPRPYSTAR SCDDPANDTA ANASDPYAVA
IGSDTQVIVF DSAKAGTTAL ATTDPWFQTY QKQFSTVGTL AAKPGVMSIF TNHHPILGFV
PIAGSTPLGG NAALLSVMNS LNATAYYPPG VQVALHGHVH DFQAINFTSN HPATIVAGNA
GDSLDVALPD PFPAISPASG VTVGSISHNN SFGFMVMDRQ PAPAKGWLFK AYTVAGKLLT
TCTQNGTSLV CDKTGFVAP