| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_2240 |
|---|
| Symbol | |
|---|
| ID | 8019904 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12D |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012856 |
|---|
| Strand | + |
|---|
| Start bp | 2383108 |
|---|
| End bp | 2384229 |
|---|
| Gene Length | 1122 bp |
|---|
| Protein Length | 373 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 644831023 |
|---|
| Product | acyltransferase 3 |
|---|
| Protein accession | YP_002982186 |
|---|
| Protein GI | 241663826 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1835] Predicted acyltransferases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCACT TCAGGCGCCT GTCCACGAGC GAATCCGCTC AACTGGACTC AGCACGCGGG
TTTTCGGCGC TCGTCGTTGC AGTCGCCCAC ACAAACCAAT TCATCGTTGC GCCCGTTTTC
AGCAAATGGG CGCCAGCGCT CGGCCTTCTC GCTCAGTCCG CTGTGATGGT GTTCTTTGTC
TTGAGCGGAT TCCTGATCGG CAAATCGATC TCCGCAAATG AGGCGCGCAA CAACGGGAAG
TTCTCTGCGC TGGACTACGG CGTCGACCGG CTGGTTCGTA TCTGGCCGCC GCTGGCTCTA
TCCATTGGTG GCCTCGTGGC GCTGGCATGG ATAGCGCCAT TCTTCTTTCC CAGCGGGACC
GCTTCGTTTC TTCAACTCGA CGGGCAAGCA CCCGGCCGTG TCGGGATCGA GATTGACCGC
AACGAGCTTC TCGGCGCATT GTTTTGTTTG AACGGCTACC TTACGGATAC GCCTCGGTCG
AATGGGCCGC TGTGGAGTCT GTCGATCGAG GTCGGCTACT ACGTTGTCGC GGGCGTCGTT
GCGATTCCGC GAGCTTGGTG GAAACTGGCC AGCGTCCCCG TCGTAGCTGG ACTGTGCTGG
CTAGCGTGGA ACAACGATCA ATTTTTCTAT TACGCTCCCG TCTGGTGTCT TGGTTATGGC
CTTTCGGTGC TTCACGATCG AGGGACGTCA CTCCCAAAAA GCCTACTCAT CTGGTGCGCG
GCGATTTCAG TGGCATGCGC GGCCTATGCG GGGCATCGCT CCATCGTTGA GCCGGACGCC
CGAAGCGCAT GGCATGCCCT TGTTGCCTTC AATCTTCTGA TCGGTCTCGC GTTTGGCTGT
CTGCTTGCCA TGGTGCTCGC TGGTGCTGTA ACTCTCCCTG CGACCTTCAA GTCGGCCGCC
TCCTACTCAT ACACGCTTTA CGTGATCCAC ACACCGTTGC TGCTTTTCTT CTTTGGCGTG
ACTCAGGCAT TCATCGGCCC GTCGATCTGG CGAGCCATGC TCATTGCAGC CGGCAGCATC
GCGGCCGTCG TTCTTGCAGC GAGGTGGAGT GCAAAGTTCG TCGAGAGCCT TCCGATGCAG
GCCATCAAAA AAAGACGGAC GCCACCAGTA TTTGGCACTT GA
|
|---|
| Protein sequence | MSHFRRLSTS ESAQLDSARG FSALVVAVAH TNQFIVAPVF SKWAPALGLL AQSAVMVFFV
LSGFLIGKSI SANEARNNGK FSALDYGVDR LVRIWPPLAL SIGGLVALAW IAPFFFPSGT
ASFLQLDGQA PGRVGIEIDR NELLGALFCL NGYLTDTPRS NGPLWSLSIE VGYYVVAGVV
AIPRAWWKLA SVPVVAGLCW LAWNNDQFFY YAPVWCLGYG LSVLHDRGTS LPKSLLIWCA
AISVACAAYA GHRSIVEPDA RSAWHALVAF NLLIGLAFGC LLAMVLAGAV TLPATFKSAA
SYSYTLYVIH TPLLLFFFGV TQAFIGPSIW RAMLIAAGSI AAVVLAARWS AKFVESLPMQ
AIKKRRTPPV FGT
|
|---|
| |