Gene Rpic12D_2238 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_2238 
Symbol 
ID8019902 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp2382046 
End bp2382591 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content67% 
IMG OID644831021 
Productglycoside hydrolase family 19 
Protein accessionYP_002982184 
Protein GI241663824 
COG category[R] General function prediction only 
COG ID[COG3179] Predicted chitinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGAGC CTCTTGTCAC CGCGGCGCAG TTGCACGCGA TCATGCCGCT GGCCGGCGCG 
CGGGCGGACG TGTTCGCGCC GATCCTGTCT GACGTGATGC TGTTCCGGCA GATCAACACG
CCGACGCGCG CCGCCGCGTT CCTGGCGCAG GTCGGGCACG AGTCTGGCCA GTTACGCTAT
CTGCGCGAAA TCTGGGGCCC GACACCGGCC CAATCCAGAT ACGAGGGCAG GGCAGACCTC
GGCAATACGC AGCCCGGTGA CGGCAAGCGC TTCATGGGCC GGGGGCTCAT CCAAATCACG
GGCCGCGCCA ACTACGCCGT CTGCGGTGCT GCGCTGGGCG TCGACCTGCT AGCGCAGCCC
GAGTTGCTGG AAAAGCCTCA GTACGCCGCA GGCTCTGCCG CGTGGTTCTG GCTGCAGCAC
AACCTGAACC GGTTTGCTGA CCGTGGCGAT TTCGTGGGCC TCACCAAGGC CATCAACGGC
GGCACGAACG GCATTGCGGA TCGCAGAGCG CTCTGGGAGC GCGCGAAAGC CGCGCTGCAA
GCTTGA
 
Protein sequence
MAEPLVTAAQ LHAIMPLAGA RADVFAPILS DVMLFRQINT PTRAAAFLAQ VGHESGQLRY 
LREIWGPTPA QSRYEGRADL GNTQPGDGKR FMGRGLIQIT GRANYAVCGA ALGVDLLAQP
ELLEKPQYAA GSAAWFWLQH NLNRFADRGD FVGLTKAING GTNGIADRRA LWERAKAALQ
A