| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_2234 |
|---|
| Symbol | |
|---|
| ID | 8019898 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12D |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012856 |
|---|
| Strand | + |
|---|
| Start bp | 2379729 |
|---|
| End bp | 2380754 |
|---|
| Gene Length | 1026 bp |
|---|
| Protein Length | 341 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 644831017 |
|---|
| Product | integrase family protein |
|---|
| Protein accession | YP_002982180 |
|---|
| Protein GI | 241663820 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.533752 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTTCCT TCTCCCAGAG TGCAAACGGC TGGCGGGCAC AGATCTATGT GGCCGGCGAG
CGAGACTCCA AGACCTTTCG AACGAAACGC GAGGCCCAGG CATGGGCGTC AACGCGTGAA
CAGGAACTGC GAGACCGGCT CACCAAGGGG GAATCCCATA CCCGCACCGT GGCTGAGATG
CTTAACCGAT ACTCTGCTGA CGTGTCGACC AAGAAGCAAG GCGCTCGAGC CGAGCAACTA
CGCATTCAAG CGTTCTTACG GGACTTCCCC GCCCTCGCAG CAAAGACGCT GGCCAACGTG
AAGACGCCAG ACATCGCCGC ATGGCGCGAC GCCAGGCTGT CGGGTCACCT GCCGGATGGC
AGGAAAATCC GCCCCAACGC CCCCTCCTCG GTGCTTCGCG ACATCAACTG GCTACGCAAT
GCATTCTTGA CTGCGCGGGA CGAGTGGCAC TGGATAGAGC ACAACCCATT TACCGGTCTC
ACGATGCCTG TTGAGAGCGC ACCGCGATCG CGCCGCGTTA CGCCTCGTGA GATCAAAATG
ATCTGCCGCA GGCTTCACTA CAGAACGGGA CACGCGCCCA AGACAAAGAG CCAAGAGGTT
GCGCTGGCGT TCCTGCTGGG ACTTCGCACA GCAATGCGCG CGGGAGAAAT TTTGAGCTTG
GGGCGCGACA CGCTGGACAT GAAACGGCGA GTCGCTACGG TCAAGCACAA GATGCAGTAT
CTGACACAGC GCCCGCGCGA GATTCCACTA TCTCGGCACG CTCTACGCCT GTTGCGGCCT
GTGGCGGACC GCCAGCAATG CTTCACGATC TCATCGAAAT CGCTTGATAC CCTGTTCCGC
AAGGCCCGCG ATCAACTGAT GATCGAAGAC CTGCACTTTC ACGACACCCG CGCCGAAGCG
CTCACGCGCC TCTCGCGCAA GGTGGACGTG ATGACGTTGG CCAAGATCAG CGGGCACACC
GACCTTCGGA TACTGCAGGA GGTGTACTAC CGCGAGGCAG CCGAGGACAT CGCCGCGCGC
CTATGA
|
|---|
| Protein sequence | MASFSQSANG WRAQIYVAGE RDSKTFRTKR EAQAWASTRE QELRDRLTKG ESHTRTVAEM
LNRYSADVST KKQGARAEQL RIQAFLRDFP ALAAKTLANV KTPDIAAWRD ARLSGHLPDG
RKIRPNAPSS VLRDINWLRN AFLTARDEWH WIEHNPFTGL TMPVESAPRS RRVTPREIKM
ICRRLHYRTG HAPKTKSQEV ALAFLLGLRT AMRAGEILSL GRDTLDMKRR VATVKHKMQY
LTQRPREIPL SRHALRLLRP VADRQQCFTI SSKSLDTLFR KARDQLMIED LHFHDTRAEA
LTRLSRKVDV MTLAKISGHT DLRILQEVYY REAAEDIAAR L
|
|---|
| |