| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_2230 |
|---|
| Symbol | |
|---|
| ID | 8019893 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12D |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012856 |
|---|
| Strand | - |
|---|
| Start bp | 2375433 |
|---|
| End bp | 2376206 |
|---|
| Gene Length | 774 bp |
|---|
| Protein Length | 257 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 644831012 |
|---|
| Product | protein of unknown function DUF81 |
|---|
| Protein accession | YP_002982176 |
|---|
| Protein GI | 241663816 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0730] Predicted permeases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGCTTG CCTATACGAT TTCCGGTCTG CTGGTCGGCC TCCTGGTCGG CCTGACGGGC
GTTGGCGGCG GCTCGCTGAT GACGCCGCTG CTGACGCTGA TGTTCGGCTT TTCGCCGGCG
ACCGCGGTGG GCACTGACCT GGCATTCGCT TCGCTGACCA AAGGCGCGGG CACGATCGCG
CATCGCAGCC ACGGTCATAT CCGCTGGGAC ATCGTCAAGC GCCTCTGCCT GGGCAGCCTG
CCGGCGGCGC TGGTGACGGT GATCGTGCTG AAGAGCGCCG GCAATCTCGA CGCTGAATGG
ATGCACGTGA TTCGCCTGAC GATTGGCGTG TCGGTCATCC TGACCGTGAT CTCGCTGTTG
TTCCGCCAGC GCGTGCTGGG CTGGCTGGCC CGCAACCCGC GCTATCGCCT GCAGGGCACG
GCGCTGGCCG CAGCCACCGT TCTCGTTGGC GCGGTGCTGG GCGTGCTGGT GACGGTGTCG
TCCATCGGTG CCGGTGCGGT GGGCGCGACG CTCATCCTGA TCCTGTATCC CGAGTTGAAG
AGCGCCGAAG TGGCCGGCAC CGACATCGCC TATGCCGTGC CGCTGACCGC CGTGGCGGGC
CTGGGCCACA TGTACCTGGG CACCATCGAC TGGAACCTCC TGGTGTCGCT GCTGGTGGGC
TCCATCCCGG GTATCTGGCT GGGCGCGCGC CTGTCCAAGA ATCTGCCGGA ACGTCTGGTG
CGCGGCGCGC TTGCCGCCAC GCTGACGATC ACGGCCATCA AGCTGGTGTC GTGA
|
|---|
| Protein sequence | MTLAYTISGL LVGLLVGLTG VGGGSLMTPL LTLMFGFSPA TAVGTDLAFA SLTKGAGTIA
HRSHGHIRWD IVKRLCLGSL PAALVTVIVL KSAGNLDAEW MHVIRLTIGV SVILTVISLL
FRQRVLGWLA RNPRYRLQGT ALAAATVLVG AVLGVLVTVS SIGAGAVGAT LILILYPELK
SAEVAGTDIA YAVPLTAVAG LGHMYLGTID WNLLVSLLVG SIPGIWLGAR LSKNLPERLV
RGALAATLTI TAIKLVS
|
|---|
| |