| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_2200 |
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| Symbol | cobD |
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| ID | 8019862 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | + |
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| Start bp | 2346868 |
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| End bp | 2347848 |
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| Gene Length | 981 bp |
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| Protein Length | 326 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644830982 |
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| Product | cobalamin biosynthesis protein |
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| Protein accession | YP_002982146 |
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| Protein GI | 241663786 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1270] Cobalamin biosynthesis protein CobD/CbiB |
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| TIGRFAM ID | [TIGR00380] cobalamin biosynthesis protein CobD |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.0660969 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCGTAT TGCCGGGCGG CGTATTCGAT CTCGGGTGGC CGCTCGTGAC GCTCGCCGCG
CTCGCGGGCG TGCTGCTCGA CCGGCTGTTC GGAGAGGTGC CGCGCTGGCA TCCGTTGGTC
GGCTTCGGGC GCCTCGCCAA AGCCATTGAG CGCTGGATGA ATCGCGCACC GGCCGCGGTA
TCGTGGTCGC GCCTCGTTGG CGTCGTTGCA TGGGCGATCG CCGTGTTGCC GCTCGTGCTG
CTTGCAGGAT GGCTCGTCGG CGTGGCGCGT GATGTGTCGC CCTGGCTCGT GGCAGCGCTT
GATGCCGTTG CACTCTATTT CGCCATTGGC GCGCGCAGCC TGCACGAACA CATCGCCCCG
ATCGCGCTTG CCCTGCGCGA TGCGGATGTT CCTCGCGCAC GCGCCCTAGC ATCGCGCATC
GTCTCGCGTG ACCTCACGCA AGCCACGGAT GAGCCCATCG CGCGCGCCGC CGTGGAATCT
GCACTGGAGA ATGGGAGCGA TGCCATCTTC GCCCCGCTGT TTTGGCTCGT CGTGGCGGGC
GCGCCGGGCG TGGTGCTGTA TCGGTTGGCC AACACGCTCG ATGCAATGTG GGGCTACCGC
AATGCGCGCT TTACCGGCTT CGGCTGGGCG GCCGCGCGCA TCGACGACGT GCTCAACTGG
ATTCCCGCCC GCCTCACGGC GATCAGCTAT GCGCTGCTTG GCCACACCGC CGATGCGCTG
AACTGCTGGC GCACGCAAGC GCCGCAATGG TCTAGCCCCA ACGCCGGCCC GGTGATGGCC
GCAGGCGCCG GCAGCCTGCG CGTTCAGCTC GGGGGCGCAG CACGCTACGA CGGCGTGGAA
GAAGCGCGCC CGTCGCTCGG CACGGGCGAG ACAGCAACGG CAGCAGATAT CGCACGCGCG
TTGACGCTCG TGTCGCGCAC GTTGTGGTTG TGGCTCGGCG CACTTGGCTT GCTTGCAGCG
CTGGCGTGGG GCCTGTCGTG A
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| Protein sequence | MSVLPGGVFD LGWPLVTLAA LAGVLLDRLF GEVPRWHPLV GFGRLAKAIE RWMNRAPAAV
SWSRLVGVVA WAIAVLPLVL LAGWLVGVAR DVSPWLVAAL DAVALYFAIG ARSLHEHIAP
IALALRDADV PRARALASRI VSRDLTQATD EPIARAAVES ALENGSDAIF APLFWLVVAG
APGVVLYRLA NTLDAMWGYR NARFTGFGWA AARIDDVLNW IPARLTAISY ALLGHTADAL
NCWRTQAPQW SSPNAGPVMA AGAGSLRVQL GGAARYDGVE EARPSLGTGE TATAADIARA
LTLVSRTLWL WLGALGLLAA LAWGLS
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