Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_2169 |
Symbol | |
ID | 8019831 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | + |
Start bp | 2310998 |
End bp | 2311882 |
Gene Length | 885 bp |
Protein Length | 294 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644830951 |
Product | transcriptional regulator, LysR family |
Protein accession | YP_002982115 |
Protein GI | 241663755 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.394311 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAACTGGG ATAACGGACG CTTTTTCCTG GCCGTGGCGC GCACCGGCAC GCTGCGCGGT GCGGCTCAGC GTCTGGGCGT GGATCAGGCC ACGGTGGGCC GCCGCATCGC GGCGCTGGAA GACGAGCTGT CAGCCAAGCT CTTCCTGCGG ACGTCGACCG CGCTGGTGCT CACCCCGGCA GGAGAAGCGC TGATCGGCCC GGCCGAAGCG ATGGAGCAGG CGGCGCACAC CATTGAGCGC CGCGTTGCCG GCATCGACGA CCAACTTGCC GGCACGATCC GCGTGGCCAC GACCGACACC ATGGCCGCCA CGTTTGTGCT GCCAGCCATC GCGCAGCTGC GGCAGCGGCA TCCGGGCATC GACGTCGTTT GCATGGCGTC CAAGAGCATT GCCAACCTGA CCAAGCGCGA GGCCGACGTG GCCGTGCGCA CGCTGCGGCC CGATTCGCCG GACCTCATTG CGCGGCGCAT CGGCCAAATG GAAACCGGTA TCTATGCGAG CCGCAGCTAC GTGGCTGCGC GTGGCGAGCC GGAGGAAGGG ACGGCCTTTG CGGGGCACGA TCTCGTGCTC TATCCGCGCA ACGAAGTGCC GTGGATGTGG GAAGACCTCT GCGGGGAGCC CATCACGCGC GGACGCGTCG TCTTGCAAAG CAATTCGGCG CTGGCGCTGT GCGAAGCGGT GGCCGCCGGC ATTGGGATGA CGGAACTGGT GTGCAGGCGT GCGCAGGCTT ATCCGCAACT TGTGCGTGTG TTGCCCAACC GCCGTAGCAT GCAGGACGTC TGGCTCGTGA CGCACGCCGA TCTGCACAAG ACCGCACGCG TACGTGCCTT GCTCGATTGC ATCGTCGAAG CGTTCGACGC GCCAAAAAAA ACCGCCACAC CGTAA
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Protein sequence | MNWDNGRFFL AVARTGTLRG AAQRLGVDQA TVGRRIAALE DELSAKLFLR TSTALVLTPA GEALIGPAEA MEQAAHTIER RVAGIDDQLA GTIRVATTDT MAATFVLPAI AQLRQRHPGI DVVCMASKSI ANLTKREADV AVRTLRPDSP DLIARRIGQM ETGIYASRSY VAARGEPEEG TAFAGHDLVL YPRNEVPWMW EDLCGEPITR GRVVLQSNSA LALCEAVAAG IGMTELVCRR AQAYPQLVRV LPNRRSMQDV WLVTHADLHK TARVRALLDC IVEAFDAPKK TATP
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