Gene Rpic12D_2161 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_2161 
Symbol 
ID8019823 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp2298245 
End bp2299681 
Gene Length1437 bp 
Protein Length478 aa 
Translation table11 
GC content68% 
IMG OID644830943 
ProductAldehyde Dehydrogenase 
Protein accessionYP_002982107 
Protein GI241663747 
COG category[C] Energy production and conversion 
COG ID[COG1012] NAD-dependent aldehyde dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.046835 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.828531 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATGCCC AGCACTTCAT CGCCAACCGT CTGATGTCGC CCGATTCGGG GATGCGCATC 
AAGGTGTTCG ATCCGTCCGA CGGCCAGTCC TTTGCCGAGA TTGCGCGCGG CAACGCCACC
GATATCAACG TGGCCGTGCA TGCCGCGCGG CGCGCGTTCG AAGGCGTGTG GGGCCAGTTG
GCGCCGGCCG AGCGCGGCCG CGTGCTGATG CGCGTGGCCC TGCGCCTGGC CGATCACGAA
GAAGAGTTGG CCCGCCTGGA AGCCCGCGAC ACCGGCAAGC CCATGCGCCA GGCGCGCGCC
GACGCCCGCG CCGTGGCCCG CTACTTCGAG TTCTACGCCG GTGCGCCCGA CAAGCTGCAC
GGGCAGACCA TCCCCTACCC GGCCGATACC ACCGTGCTGA CCGTGCGCGA GCCGCATGGC
GTGACGGCGC ACATCATCCC GTGGAACTAC CCGATGCAGA TCTTCGGACG GAGCGTGGGC
GCCGCATTGG CGGCCGGCAA CGCGTGCGTG GTCAAGCCCG CGGAGGACGC GTGCCTGTCG
GTCCTGCGCG TGGCGGAGCT GGCCGCAGAA GCCGGCCTGC CCGATGGCGC ACTCAACATC
GTCACCGGCT ATGGCCACGA AGCCGGTGCG GCTCTGGCAG CGCATCCCGG GGTCAACCAT
GTGTCGTTCA CGGGGTCGCC GGAAACGGGC AAGGCCATTG TGCGAGCGGC CGCCGAAAAC
CACGTGCCCG TCACGCTGGA ACTGGGCGGC AAGTCTCCGC AGATCGTGTT TGCCGATGCC
GATCTGGAAG CGGCCATTCC GGCCGTGGTG AACGGCATCA TCCAGAACGC CGGCCAGACC
TGCTCTGCAG GCAGCCGCGT ACTGATCGAG CGCAGCATGT ACGAGGCAAT GCTGGACCGG
CTCGCCATGG TGTTCGAATC GATCAGGGTC GGCCCGTCGT CGCTGGATCT GGATTGCGGC
CCGCTCATCA ACCCCAAGCA GCAGCAGCGC GTGTGGGATT TCGTCTCGGA TGCGCAGCAC
GCCAATATTC CGGTGATGGC GCAGGGCCAG GTGGTGCCCG AGGCGCCCGA GACCGGCTAT
TACCAGGCGC CGATGCTGCT GCGCGATGTG CCCCACACGC ACCGCCTCGC CCAGCAGGAA
GTGTTCGGCC CGCTGCTGGC CGCCATGCCG TTCGACACCG AAGCCGAAGC GCTGGCGCTG
GCCAACGGCA CACCGTACGG CCTGGTGGCC GGCGTGTGGA CGAACGATGG TGGCCGGCAG
ATGCGCCTTG CGCGCAAGCT CAGGGCCGGC CAGGTCTTCA TCAACAATTA CGGCGCGGGC
GGTGGCGTTG AACTGCCCTT CGGCGGAACG GGCCAGTCGG GGCACGGGCG CGAAAAGGGC
TTCGAAGCGC TCTACGGCTT TACCACGCTC AAGACCATCG CCATCCGCCA CGGCTAA
 
Protein sequence
MHAQHFIANR LMSPDSGMRI KVFDPSDGQS FAEIARGNAT DINVAVHAAR RAFEGVWGQL 
APAERGRVLM RVALRLADHE EELARLEARD TGKPMRQARA DARAVARYFE FYAGAPDKLH
GQTIPYPADT TVLTVREPHG VTAHIIPWNY PMQIFGRSVG AALAAGNACV VKPAEDACLS
VLRVAELAAE AGLPDGALNI VTGYGHEAGA ALAAHPGVNH VSFTGSPETG KAIVRAAAEN
HVPVTLELGG KSPQIVFADA DLEAAIPAVV NGIIQNAGQT CSAGSRVLIE RSMYEAMLDR
LAMVFESIRV GPSSLDLDCG PLINPKQQQR VWDFVSDAQH ANIPVMAQGQ VVPEAPETGY
YQAPMLLRDV PHTHRLAQQE VFGPLLAAMP FDTEAEALAL ANGTPYGLVA GVWTNDGGRQ
MRLARKLRAG QVFINNYGAG GGVELPFGGT GQSGHGREKG FEALYGFTTL KTIAIRHG