Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_2128 |
Symbol | |
ID | 8019789 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | + |
Start bp | 2269355 |
End bp | 2270038 |
Gene Length | 684 bp |
Protein Length | 227 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 644830909 |
Product | hypothetical protein |
Protein accession | YP_002982074 |
Protein GI | 241663714 |
COG category | [R] General function prediction only |
COG ID | [COG1999] Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0544921 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTGATT CGCGAGAGGC ACATGCCGGA AGGCGCCAGC AAGGCCCGGT GTCGAAGGCG CCCGGCCTCT GGGCGGCCGG GGCTGGCTGC CTGGTACTGA GCATCGCCTT CGTCATCGCA CTGTATTGCT TGACGGCAGG TTTCAAGGTC TGGACCTTGG ATGACCGCCG CAGCATGATG TCTGCGGACC GAAGTCTGAT TGCACCACCC GTGGAGCTTC GCGATGAACG CGGCCGCAGT TTTGTGCCGT GGACCCCAAC GTCCCGAGAC GAGCATGTCT ATCTGGTGGA TTTCATCTAC ACGCGGTGCA CCACAGTATG CGCGGCGCTG GGTTCGGAGT TCTTTCAACT CCAGCAACGT GTGAAAACGG GAGCGCTGGC GGGCCGCGTC GAGCTCCTGT CGGTTTCCAT TGATCCCGCT CATGACGATG CGCGAAGCCT AGGCGCATAT GGCAACCAGC AACATGCCGA CCCAGCAATC TGGCGCATCG GCGCTCCGCT GACCACGGAA TCAAAGGAAG CGCTATTGCG TTCGCTCGAT GTGGTTGCCA TTCCCGACGG GCTCGGCGGA TACGTGCACA ACGGCGAGAT TCATCTCATC GACGCGCGTG GTGTCGTCCT CGGTCTTTAC GATTACAGCG CGTTCGATGC CGCGTTGACG GCGGCTCAGC AGGTGCTGCG ATGA
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Protein sequence | MRDSREAHAG RRQQGPVSKA PGLWAAGAGC LVLSIAFVIA LYCLTAGFKV WTLDDRRSMM SADRSLIAPP VELRDERGRS FVPWTPTSRD EHVYLVDFIY TRCTTVCAAL GSEFFQLQQR VKTGALAGRV ELLSVSIDPA HDDARSLGAY GNQQHADPAI WRIGAPLTTE SKEALLRSLD VVAIPDGLGG YVHNGEIHLI DARGVVLGLY DYSAFDAALT AAQQVLR
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