Gene Rpic12D_2128 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_2128 
Symbol 
ID8019789 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp2269355 
End bp2270038 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content62% 
IMG OID644830909 
Producthypothetical protein 
Protein accessionYP_002982074 
Protein GI241663714 
COG category[R] General function prediction only 
COG ID[COG1999] Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0544921 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTGATT CGCGAGAGGC ACATGCCGGA AGGCGCCAGC AAGGCCCGGT GTCGAAGGCG 
CCCGGCCTCT GGGCGGCCGG GGCTGGCTGC CTGGTACTGA GCATCGCCTT CGTCATCGCA
CTGTATTGCT TGACGGCAGG TTTCAAGGTC TGGACCTTGG ATGACCGCCG CAGCATGATG
TCTGCGGACC GAAGTCTGAT TGCACCACCC GTGGAGCTTC GCGATGAACG CGGCCGCAGT
TTTGTGCCGT GGACCCCAAC GTCCCGAGAC GAGCATGTCT ATCTGGTGGA TTTCATCTAC
ACGCGGTGCA CCACAGTATG CGCGGCGCTG GGTTCGGAGT TCTTTCAACT CCAGCAACGT
GTGAAAACGG GAGCGCTGGC GGGCCGCGTC GAGCTCCTGT CGGTTTCCAT TGATCCCGCT
CATGACGATG CGCGAAGCCT AGGCGCATAT GGCAACCAGC AACATGCCGA CCCAGCAATC
TGGCGCATCG GCGCTCCGCT GACCACGGAA TCAAAGGAAG CGCTATTGCG TTCGCTCGAT
GTGGTTGCCA TTCCCGACGG GCTCGGCGGA TACGTGCACA ACGGCGAGAT TCATCTCATC
GACGCGCGTG GTGTCGTCCT CGGTCTTTAC GATTACAGCG CGTTCGATGC CGCGTTGACG
GCGGCTCAGC AGGTGCTGCG ATGA
 
Protein sequence
MRDSREAHAG RRQQGPVSKA PGLWAAGAGC LVLSIAFVIA LYCLTAGFKV WTLDDRRSMM 
SADRSLIAPP VELRDERGRS FVPWTPTSRD EHVYLVDFIY TRCTTVCAAL GSEFFQLQQR
VKTGALAGRV ELLSVSIDPA HDDARSLGAY GNQQHADPAI WRIGAPLTTE SKEALLRSLD
VVAIPDGLGG YVHNGEIHLI DARGVVLGLY DYSAFDAALT AAQQVLR