Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_2120 |
Symbol | |
ID | 8019781 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | - |
Start bp | 2260117 |
End bp | 2261685 |
Gene Length | 1569 bp |
Protein Length | 522 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 644830902 |
Product | Gluconate 2-dehydrogenase (acceptor) |
Protein accession | YP_002982067 |
Protein GI | 241663707 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAACGT TTGATTTCAG CGATGACTCG GTCGTCGTGA TCATCGGTTC TGGTGCCGGC GGCGGCACGC TGGCCAACGA GCTGTGCCAG AAAGGCATCA AGGTCGTCGT GCTGGAAGCG GGCGGCAAGC AGTCGAATGC CAGCTTCATC AATGATGAAT GGAAGGCCTT CAGCCAACTG GCTTGGCTCG ACAAGCGCAC GACCTCCGGA AGCTGGCGCA TTGCCAAGGA TTTTGCGGAA CTCCCTGCCT GGATCTGCAA GACGGTTGGA GGTACAAGCA CGCACTGGGC CGGCGCTTCG CTGCGCTTCC AGGAGCATGA ATTTCAAGCC CGGACGCTGT ACGGCGACCT CAAGGGAGCG AATCTGCTGG ATTGGCCTCT CACGCTCAAG GAGCTGGAGC CGTATTACGC CAAGGCCGAA GACAAGATGG GCGTCACGCG CACCAATGGC ATCCCGGGCC TGCCGGGCAA CAACAACTTC AAGGTGATGT ACAACGGCGC CACCCGGCTC GGCTATAAGG AAGTGCACAC CGGCAACATG GCCATCAACA GCAAGCCGCG CAAGGGTCGC GCACGCTGCA TGCAGCTCGG CTTCTGCTTC GAGGGCTGCA AGAGCGGCGC CAAATGGTCG ACCCTGTACA CCGAGTTGCC CGAAGCAGAC GCTACCGGCA ATTTCGAGTT GCGCACGCAG GCGCATGTCA CCCGCATCGA ACACGATGAC AAGGGGCGCG TGAATGCCGT CATCTATATG GACAAGGACG GCAAGGAACA GCGGCAAAAG GCGCGCATCG TCTGCGTGGC GGGGAACTCC ATCGAAACAC CGCGTCTGCT GCTGCTATCC GCTTCGAACA TGTTCAAGGA CGGTCTGGCC AATTCGTCGG GTCAGGTCGG CCGCAATTAC ATGCGCCATA TGACCGGGTC GGTTTATGCG GCATTCAAGG AGCCTGTGCA CATGTACCGC GGCACGACCA TGGCCGGCAT TGTGCGTGAC GAGGCTCGCC ACGATACCCG TCGTGGGTTC GTCGGCGGTT ACGAACTCGA AACGCTGTCG CTGGGTATTC CGTTCATGGC AGCCTTTCTG AATCCGGGGG GGTGGGGTTC CGACTTCGCG TGGTGGATGG ATCACTATAC GAATTTGGCG GGCATGTGGC TCGTCGGTGA AGACATGCCG CGTGAGACGA ACCGCGTTAC GCTCAATACG AACGTCAAGG ATCAATGGGG CAACTACGTG CCGAATGTGC ACTTCGATGA TCACGAAAAC GACATCGCCA TGCGCAAACA CGCCTACACC CAGGCCGAGC GCATCTACGG CGCAGTCGGA GCGATCAAGA CGTTCCGCAC GCCGCCGTAT CCGTCGACCC ATAATCTGGG TACCGCCCGC ATGAGCGCGC GCCCGCAGGA TGGCGTCTGC AATAAATGGG GGCAGACACA TGACATCGCG AATCTGTTCA TCAGCGACGG CAGCCAGTTC ACCACGGGCG GCTCGGAAAA CCCGACATTG ACCATCGTCA CGCTCGCTAT CCGGCAGGCT GACTACATTG CCAAGCAGAT GTCGCAACGT TCGATCTGA
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Protein sequence | MATFDFSDDS VVVIIGSGAG GGTLANELCQ KGIKVVVLEA GGKQSNASFI NDEWKAFSQL AWLDKRTTSG SWRIAKDFAE LPAWICKTVG GTSTHWAGAS LRFQEHEFQA RTLYGDLKGA NLLDWPLTLK ELEPYYAKAE DKMGVTRTNG IPGLPGNNNF KVMYNGATRL GYKEVHTGNM AINSKPRKGR ARCMQLGFCF EGCKSGAKWS TLYTELPEAD ATGNFELRTQ AHVTRIEHDD KGRVNAVIYM DKDGKEQRQK ARIVCVAGNS IETPRLLLLS ASNMFKDGLA NSSGQVGRNY MRHMTGSVYA AFKEPVHMYR GTTMAGIVRD EARHDTRRGF VGGYELETLS LGIPFMAAFL NPGGWGSDFA WWMDHYTNLA GMWLVGEDMP RETNRVTLNT NVKDQWGNYV PNVHFDDHEN DIAMRKHAYT QAERIYGAVG AIKTFRTPPY PSTHNLGTAR MSARPQDGVC NKWGQTHDIA NLFISDGSQF TTGGSENPTL TIVTLAIRQA DYIAKQMSQR SI
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