| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_2107 |
|---|
| Symbol | |
|---|
| ID | 8019768 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12D |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012856 |
|---|
| Strand | + |
|---|
| Start bp | 2250857 |
|---|
| End bp | 2251786 |
|---|
| Gene Length | 930 bp |
|---|
| Protein Length | 309 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 644830891 |
|---|
| Product | beta-lactamase domain protein |
|---|
| Protein accession | YP_002982056 |
|---|
| Protein GI | 241663696 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0491] Zn-dependent hydrolases, including glyoxylases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTCACGA CACTGATCAG TCCGGCCCCG ACGGTGTCTG CGGCCCCCGC GCGCGTCACG
CTGTTGCGCC TGCAGGACGG CCTGTACGCG GCGCGCGCCG TGAATGCAGA AGCCTCGCGC
GCGAATGCCG GAGAAGTCGT GCCCACGCTG GTGCACACGA CGGGCAACGG CGTGCTCGTG
GTGGACCCTG GCCCGCACGC GCGATGGGGA CACCACCTGA TCGCGGCCAT CCGGCACATC
ACGGCCGAAC CCATCCGCTG GGTGGTCAAC ACGCATGCGC ATCCCGAGCA TGTGCTGGCC
AACGCCGCCT TCGCACAACT GCAGCCGCGC CCTGCCTTCC TGGCCTCCGC CGCCACCGCC
GACCTCATGC GCCAGCGTTG CGAAACCTGT CTGGCGCGCC TGACCGCCAT GCTGGGTGCG
CGCGTCATGC ATGAAACGGA GATCGTCTAT CCGGAACCGG CACTGCGCGA TGGCGATTGG
CTGCACACCG GCAAGACTGC GTGGCAAGTC CACGTCTGCA CGGCCGCGCA TAGCGCATCC
GACACGGTGC TGTACGCGCC GCAGCGCGGG GTGCTGTGCA CAGGCGGCCT GGCATATCTG
CAGCGCATTC CGGACCTGCA GGACGGCTCG CTGGCTGGAT GGCGCCAAGC ATTGCATGCG
CTTGTGCAAC TGCCCGCCAA CATCGTCGTC GGCACCGCCA TCGGCACGCC TGCTCAGATG
CTGCGGCCGA CGCTCGCCTA TCTCGACATG CTCGACAGCA CGGTCACGCG CGCCATTGAA
GGCGGCGGCG ACGCAGCCCG CGCGCTCGCG TATGTCCCGG GCGACGCCTA TCGCGACTGG
CGCAACTTTC ATCCCCGCCA TGCGCTGAAC GTCGGACGTG CGTGGCGCGA ACTCGAAGAT
CGCTGGATGC AAAGCGCGCC GAGCGCCTGA
|
|---|
| Protein sequence | MLTTLISPAP TVSAAPARVT LLRLQDGLYA ARAVNAEASR ANAGEVVPTL VHTTGNGVLV
VDPGPHARWG HHLIAAIRHI TAEPIRWVVN THAHPEHVLA NAAFAQLQPR PAFLASAATA
DLMRQRCETC LARLTAMLGA RVMHETEIVY PEPALRDGDW LHTGKTAWQV HVCTAAHSAS
DTVLYAPQRG VLCTGGLAYL QRIPDLQDGS LAGWRQALHA LVQLPANIVV GTAIGTPAQM
LRPTLAYLDM LDSTVTRAIE GGGDAARALA YVPGDAYRDW RNFHPRHALN VGRAWRELED
RWMQSAPSA
|
|---|
| |