| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_2059 |
|---|
| Symbol | |
|---|
| ID | 8019720 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12D |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012856 |
|---|
| Strand | - |
|---|
| Start bp | 2196619 |
|---|
| End bp | 2197653 |
|---|
| Gene Length | 1035 bp |
|---|
| Protein Length | 344 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 644830845 |
|---|
| Product | inner-membrane translocator |
|---|
| Protein accession | YP_002982010 |
|---|
| Protein GI | 241663650 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG4177] ABC-type branched-chain amino acid transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGGGC TGCAGCAATT GAGGCGGTCT GCACGGCCTG TTGAGGGCTC TGCGGCGCAT
GGGTTGCCGC AAGCGCGTTG GTCGCCGTTT GAGATCGCGT TCTGGTGCGT GCCGATCGCG
GTGTTCTTTC TTCTTCCGGA TTACCTCGTC TTCGGCAGCC AGGTGTTGAT CGTCGGGCTG
TTTGCGTTGT CGCTCGACCT GGTGCTCGGC TATGCGGGCA TCGTGTCGCT CGGACATGCA
GGCTTCTTCG GGCTTGGCGC CTATACCGCC GGACTGCTCG CGGCACATGG CTGGGGTGAA
CCGCTCACCG GTCTGGCCGC GGGCGCTGTC GTCGCTGCGC TGGCCGGCTT CTGTGTGAGC
TTTCTCGTCG TGCGCGGGCA GGATCTGACA CGACTCATGG TCACGCTCGG CATCGGCCTG
ATGCTGTATG AAGCGGCCAA CAAGATGGCG TTTCTCACGG GCGGTGTTGA CGGCCTTTCC
GGTGTGACGA TGCACAAGCT GCTCGGCACA TTTGAGTTCG ATCTGGAGGG GCGCACGGCT
TACTTGTATA GCTTGGTCGT GCTGTTTCTG GTGTTTGGAG GGTTGCGTCG CCTGGTGCGC
TCGCCGTTCG GGTTGTCGCT GCGCGGCATT CAGCAGGGGC CGAAGCGCAT GCCAGCCATC
GGCGCGAATG TTCGCATGCG GCTGGTGGCC GCGTTCACCG TCAGCGCAGC GATTGCCGGT
GTCGCAGGCG GGCTGCTCGC GCAGACCACG CAATTTGTCG GTCTGGATTC GCTGGGCTTC
TCGCGCTCGG CAGAGTTGCT GATCATGCTC GTGCTGGGCG GTGCAGGCCG GTTGTACGGC
GCGTTGATTG GCGCAGCGGT GTTCATGATT GCGCAGGACG TGTTGGCCGG CATCAATCCC
GTCTACTGGC AGTTCTGGAT CGGCCTGCTG CTGATGGTGA TCGTGTTGTT TGCGCGGGGC
GGCATTCTCG GTGGGCTGGA AACTGCGGTG TCTGCGGTCA GCGCGCGGCG CGCTCGCAAG
GGAGGTGCTT CATGA
|
|---|
| Protein sequence | MSGLQQLRRS ARPVEGSAAH GLPQARWSPF EIAFWCVPIA VFFLLPDYLV FGSQVLIVGL
FALSLDLVLG YAGIVSLGHA GFFGLGAYTA GLLAAHGWGE PLTGLAAGAV VAALAGFCVS
FLVVRGQDLT RLMVTLGIGL MLYEAANKMA FLTGGVDGLS GVTMHKLLGT FEFDLEGRTA
YLYSLVVLFL VFGGLRRLVR SPFGLSLRGI QQGPKRMPAI GANVRMRLVA AFTVSAAIAG
VAGGLLAQTT QFVGLDSLGF SRSAELLIML VLGGAGRLYG ALIGAAVFMI AQDVLAGINP
VYWQFWIGLL LMVIVLFARG GILGGLETAV SAVSARRARK GGAS
|
|---|
| |